Pairwise Alignments

Query, 198 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 212 a.a., MarC family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (250), Expect = 1e-26
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 8/198 (4%)

Query: 4   VLFSVYLKMLVLYSPFFVLSCFISLTRGYSSKERRRLAWKVALATLVSSVLLYLFGRVIF 63
           +    +L ++   +P  ++  F+SLT   + +E+ + A    +A  +  ++  L G+++ 
Sbjct: 8   IFLQFFLGLVAAVNPVGIMPVFVSLTGHMTLEEKNKTAATANIAVAIILIIALLAGQMLL 67

Query: 64  SVFGITVDAFRIGAGSVLFISALGMAQGKSAVQTDNVQQ--------DVTIVPLTIPLTV 115
            +F I++D+FR+  G +L   A  M  GK      N Q+         + +VPL +PL  
Sbjct: 68  DLFSISLDSFRVAGGLLLLSIAFSMMSGKLGEDKQNKQEKSEYISREQIAVVPLAMPLMA 127

Query: 116 GPGTIGALLVMGVSQPHWDDKITAILSIALASLTVGVVLYLSNRIERILGDQGLQIVSRL 175
           GPG I + +V G   P+  D +  IL++   S    ++   +  I R+LG  G+ +++R+
Sbjct: 128 GPGAISSTIVYGSRYPNMLDTLGIILTVVAFSFCSWLLFRSAPYIVRLLGQTGINVITRI 187

Query: 176 MGLFVCALAAQIIFTGVR 193
           MGL + AL  + I  G+R
Sbjct: 188 MGLILGALGIEFIANGLR 205