Pairwise Alignments

Query, 689 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

Subject, 685 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (344), Expect = 2e-36
 Identities = 168/670 (25%), Positives = 275/670 (41%), Gaps = 72/670 (10%)

Query: 61  PRQPVPASDGGDYLKTIPGFALVRNGGTNGDPVLRGMFGSRLNILTNGSMMLGACPGRMD 120
           P    P SD    L  +PG A+  NG   G    RG+FG R+N   NG  + GA P  MD
Sbjct: 47  PEAQAPVSDISGLLTQLPGTAVNGNGPLTGIAQYRGLFGDRVNTQVNGVSLAGAGPNAMD 106

Query: 121 APTSYISPETYDKLTVIKGPQTVLWGPGASAGTILFEREPEEFGELGTRLNASVLAGSNG 180
            P SY S    +++ + +G   V  G     G+I        F +   R+ A+   G+ G
Sbjct: 107 TPLSYASLINSERIEMHRGIAPVSAGTNTVGGSIKVIESQASFNDTQGRI-AAQYQGNGG 165

Query: 181 RFDKVIDAAAGGPLGYVRVIGNQAHAD-DYKDGNNDTVA-SRYDKW--NGDVAVGFTPDA 236
           +         GG    + V G+  H D D K G++  ++ + YDK    G   +  +   
Sbjct: 166 QSHLGAKVNVGGKNHALLVYGDLMHGDEDMKSGDDLRLSPTGYDKQIIGGQYRLNLSDKG 225

Query: 237 DTLLELTAGRGDGEARYAGRG---MDGSQFLRESLGLRFEKSNIGDVLDKVEAQVYYNYA 293
                +  G    E   AG     MD   F+R    ++ E  +  D  D +   + ++ A
Sbjct: 226 LDDESIAIGYQHLETTEAGTPALPMD-IDFIRTDR-VKLEGEHRLDTWD-LNWHLAFSDA 282

Query: 294 DHVMDNYSLRTPSGTGMMAGPMASNVDRRTLGARI---KATWRWADVQLISGLDAQTNEH 350
            H MDN+S R    +   A    +N + ++    +   +  W       + GLD+Q +EH
Sbjct: 283 RHGMDNFSERQKPES---ANARYNNAESQSYDMALTLGRDAW-------LFGLDSQLSEH 332

Query: 351 RQRSSMGIDTYKDLPRVKDANFHNYGVFGELTWYAADRDRLI--TGARLD--RASAKDFR 406
              +S+  D  K + RV + N      +     +  D D+     GAR+   R  A +  
Sbjct: 333 ---NSLITDPTKPMFRVDNFNKVQDDTYSAFAQWQQDIDQWHWQLGARVKHYRTDADEVS 389

Query: 407 QTSGSGM------MKRPNPTADDTRADT----LPSGFVRYEHDLADSPTTLYAGLGHSER 456
            +    M      M R N  AD T+A T    + +G  R   +L     T   GL   + 
Sbjct: 390 HSMAGAMPAIKVLMDRYNQ-ADRTQAQTGLDLVINGRYRVNEEL-----TWILGLARKQD 443

Query: 457 FPDYWELF----SPNTGATGSVNAFDG---VKPEKTTQLDFGAQYKADDLEAWASGYIGR 509
              Y + +      +TG       + G   +  E   QL+ GA +    L      ++ R
Sbjct: 444 SASYQQRYLWIPMQSTGGLADGRTYVGKMDLDLETAYQLELGADFNRQGLSISPRVFLHR 503

Query: 510 VQDFI--------LFDYRPGMMGTTS--QARNVDARIMGGELGAAYKLTQNWKADATLAY 559
           + D+I               MMG+    +  NVDA+++G ++ A+Y++T  W+ D   +Y
Sbjct: 504 IDDYIQGVKSTDPAVIMAANMMGSQDPMEFANVDAQLLGMDINASYEITDQWQLDLLASY 563

Query: 560 AWGKNSSDGKALPQMPPLDARLGLTYSEDDWSAGALWRVVAAQNRIDQNKGNVVGKDYDK 619
             G+       L ++ P    LGL + E +WSA     +VAAQ+++ +++          
Sbjct: 564 VSGERRDIDDNLYRIAPPKVNLGLNFREGNWSARIEGVMVAAQDKVSESQSE------QA 617

Query: 620 SSGFGVFSLNAAYRVNKHFKVSTGVDNLFGKAYAEHLNLAGNAGFGYPASDPQAIKEPGR 679
           S+G+G+ +L  AY   +++ V  GV+NLF   Y +HL    N  F    +  Q +   G 
Sbjct: 618 SAGYGLVNLVLAYD-RQNWLVKAGVNNLFDIDYEDHLG-GYNRVFNADLTPGQRMPGTGM 675

Query: 680 TLWTKVDMTF 689
             W   +  F
Sbjct: 676 NAWLTGEYRF 685