Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (464), Expect = 6e-51
 Identities = 106/285 (37%), Positives = 167/285 (58%), Gaps = 6/285 (2%)

Query: 53  WPAGQEHIVWLIRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVI 112
           W + ++ +VW +R+PR+L  A++GA LA+ GA LQ +  N LA+P ++GV+ GA++  VI
Sbjct: 50  WSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVI 109

Query: 113 VVLHVGEVIGLLTLPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAAN 172
           ++L    +   +    AA +GALL  L+ L V +R  RL + RLLL GVA+  +  A   
Sbjct: 110 LLLFFPSLNSPVAFMAAAVLGALLFTLL-LVVMARKLRLTTARLLLVGVALGILSGAVVT 168

Query: 173 LLLFMGDHRAASAVMFWMLGGLGLARW--ELLAVPTATVLLGLGLLLGMARPLNALMAGE 230
              +  D      +M+W++G +    W   LL++    V++ L L  G+   L+ LM GE
Sbjct: 169 WAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGGV---LDKLMLGE 225

Query: 231 QTAVTLGLNARNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPV 290
             A  LG++   VR ++ L  +L+ G  V++ G IGFVGL+VPH+ R  +G+E+R LLP+
Sbjct: 226 GHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPL 285

Query: 291 CVLLGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335
             L G+L LV  D+ AR  +   +LP+GV T  +G   FI ++ R
Sbjct: 286 SALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330