Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 347 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  223 bits (568), Expect = 5e-63
 Identities = 133/329 (40%), Positives = 200/329 (60%), Gaps = 6/329 (1%)

Query: 11  AALGAVLLVSCVLSLG--FGPARVPVEVVWRIVLYKAFGVGEVNWPAGQEHIVWLIRVPR 68
           AAL A++++   L +G   G   +P + V + V  + +  G    P   E I+W  R+ R
Sbjct: 18  AALAALVILFAALWMGAAIGETAIPFKTVAQTVANRLWNAGYPLAPI-DEGIIWSYRLSR 76

Query: 69  MLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEVIGLLTLPL 128
            ++ A  GA LAL GAVLQ++ RNPLADP++LG+++GA+ GAV V + +G   G+LTLPL
Sbjct: 77  AVVAASCGASLALSGAVLQSLLRNPLADPYILGISAGASTGAVSVAI-LGVGAGMLTLPL 135

Query: 129 AAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANLLLFMG-DHRAASAVM 187
            AFIGAL++ ++V  +A + GR  +  ++L GVA S +  A  + ++        A  +M
Sbjct: 136 GAFIGALVAFVLVSLLAVKAGR-GTAAIILAGVAGSQLFNALTSFIVTKAATAEQARGIM 194

Query: 188 FWMLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTAVTLGLNARNVRLKV 247
           FW+LG L   RW    +     LLGL + L  ARPL+A   G ++A +LG++ R     +
Sbjct: 195 FWLLGNLSGVRWPDAWLAVPATLLGLVVCLWHARPLDAFTFGSESAASLGISVRRTYFAL 254

Query: 248 FLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVLLGSLFLVWVDVAAR 307
             V+++MT V+VSI GSIGFVGL++PH AR LVG  H  LLP   L+G++F++  D+ +R
Sbjct: 255 VGVSAMMTAVMVSIVGSIGFVGLVIPHAARMLVGVRHGVLLPAAALIGAVFMILADILSR 314

Query: 308 TLIAPEDLPIGVATAAIGGLFFIGLMRRR 336
            LI  + LPIGV TA +G   F  ++ +R
Sbjct: 315 VLIPGQVLPIGVITALVGAPAFALILGQR 343