Pairwise Alignments

Query, 336 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  200 bits (509), Expect = 4e-56
 Identities = 113/342 (33%), Positives = 190/342 (55%), Gaps = 15/342 (4%)

Query: 4   RRYALLLAALGAVLLVSCVLSLGFGPARVPVEVVWRIVLYKAFGVGEVNWPAGQEHIVWL 63
           ++Y L     G VL+++ ++   +       ++    ++    G G+    A    ++W 
Sbjct: 9   KKYTLKKLIFGFVLIIALIIISIYSLCTGDFQLSISQIINSLLGSGD----ASSNLVIWN 64

Query: 64  IRVPRMLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVG----E 119
           IR+PR+    L G GL++ GAV+Q V RNPLA P+ +G++ GA  GA + ++ +G    E
Sbjct: 65  IRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAE 124

Query: 120 VIGLL------TLPLAAFIGALLSMLVVLAVASRNGRLESDRLLLCGVAVSFVMMAAANL 173
             G +      ++ + AF+G+LL +  VL +A   G L  + ++L GVA+S +  AA  L
Sbjct: 125 STGHIAINNPYSITIFAFLGSLLGVCAVLILAKLKG-LSPEAMVLAGVAISSLFTAATTL 183

Query: 174 LLFMGDHRAASAVMFWMLGGLGLARWELLAVPTATVLLGLGLLLGMARPLNALMAGEQTA 233
           + +  D    +A+++W  G LG   W  + +      + L   +      NAL +GE+TA
Sbjct: 184 IQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETA 243

Query: 234 VTLGLNARNVRLKVFLVASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPVCVL 293
            +LG+N   +RL   LVASL+T V V+  G IGFVGL+ PHI R  VG ++R L+P+C +
Sbjct: 244 KSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSI 303

Query: 294 LGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335
            G++ ++  D  ART+I+P  LP+G+ T+ +G   F+ L+ +
Sbjct: 304 FGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLLTK 345