Pairwise Alignments

Query, 560 a.a., membrane protein insertase from Pseudomonas simiae WCS417

Subject, 541 a.a., protein translocase subunit yidC (RefSeq) from Shewanella sp. ANA-3

 Score =  491 bits (1265), Expect = e-143
 Identities = 258/555 (46%), Positives = 348/555 (62%), Gaps = 22/555 (3%)

Query: 1   MDIKRTILIVALAIVSYVMVLKWNQDYGQAALPTQNVATNQAAPAIPDTPLGNNASASAD 60
           M+ +R IL++ L  VS+++  +W  D     + T++     A             + SAD
Sbjct: 1   MESQRNILLIGLLFVSFLLWQQWQADKAPKPVATESSVVANAT-----------TNHSAD 49

Query: 61  VPSANGETSAPLETPVVTNKDLIHVKTDVLDLAIDPQGGDIAQLKLPLYPRRQDHPDVPF 120
           VP A  +TS P    +   ++LI VKTD LD+ I+P GGDI    L  +   Q   D PF
Sbjct: 50  VPEA--DTSVP--AALTATQNLITVKTDQLDVQINPVGGDIVFAALVSHKLEQGK-DQPF 104

Query: 121 QLFDNGGERTYLAQSGLTGTNGPDARATGRPVYSTEQKTYQLADGQNQLNVDLKFSLD-G 179
            L +   + TY+AQSGL G +G D+ A GR  ++  +  + LADGQ+ L V L +  D G
Sbjct: 105 VLLEQTKDFTYIAQSGLIGRDGIDSSAKGRAAFAANKTEFTLADGQDTLEVPLTYVADNG 164

Query: 180 VNYIKRFSFTRGLYDLKVTYLIDNEGDKPWSGNLFAQLKRDASSDPSSSTATGTATYLGA 239
           V Y K F F RG +++ + Y I+N    P    ++ Q+K+      SS       TY GA
Sbjct: 165 VTYTKVFVFHRGKFNVDIDYKINNTSAAPLQVQMYGQIKQTIKPSESSMMMP---TYRGA 221

Query: 240 ALWTSSEPYKKVSMKDIDKGSLKETVQGGWVAWLQHYFVTAWIPSKGEANLVQTRKDSQG 299
           A  T    Y+K   +D+ K +L +   GGW A LQHYFV+AWIP   ++N + +   + G
Sbjct: 222 AFSTQDVRYEKYKFEDMSKSNLNQPTLGGWAAMLQHYFVSAWIPPATDSNTIFSSVSAGG 281

Query: 300 NYIIGFTGPALTVAPGAKAETSATLYAGPKSQAVLKELSPGLELTVDYGFLWFIAQPIFW 359
              IGF G    +APGA  E S+  Y GPK Q  L  LS  L L VDYGFLW++A PI W
Sbjct: 282 LANIGFRGAVYDIAPGATQEISSQFYVGPKDQKALSALSDTLNLVVDYGFLWWLAVPIHW 341

Query: 360 LLQHIHSIVGNWGFSIIFLTMLIKGIFFPLSAASYKSMARMRAVAPKLAALKEQHGDDRQ 419
           LL    S VGNWG +II +T+ ++G+ FPL+ A Y SMA+MR + PKL  LKE+ GDDRQ
Sbjct: 342 LLMFYQSFVGNWGVAIILITLTVRGLLFPLTKAQYTSMAKMRNLQPKLQDLKERFGDDRQ 401

Query: 420 KMSQAMMELYKKEKINPLGGCLPILVQMPVFLSLYWVLLESVEMRQAPFMLWITDLSIKD 479
           KM QAMMELYKKEK+NP+GGCLPIL+QMP+F++LYWVLLES E+R APFMLWI DLS++D
Sbjct: 402 KMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESFELRHAPFMLWIHDLSVQD 461

Query: 480 PFFILPIIMGATMFIQQRLNPTPP--DPMQAKVMKMMPIIFTFFFLWFPAGLVLYWVVNN 537
           P++ILP++MGA+MF+ Q++ P  P  DPMQ K+M+ MP+IFT FFLWFP+GLVLYW+V N
Sbjct: 462 PYYILPLLMGASMFVMQKMQPIAPTMDPMQVKMMQWMPMIFTVFFLWFPSGLVLYWLVGN 521

Query: 538 VLSISQQWYITRKIE 552
           +++I QQ  I   +E
Sbjct: 522 IVAIIQQKIIYAGLE 536