Pairwise Alignments

Query, 514 a.a., ATP F0F1 synthase subunit alpha from Pseudomonas simiae WCS417

Subject, 513 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Shewanella loihica PV-4

 Score =  797 bits (2059), Expect = 0.0
 Identities = 395/512 (77%), Positives = 457/512 (89%)

Query: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLADVMSGEMIEFPGGVFG 62
           QLN +EIS++IK RI++ +V S+ARNEGT+V+VSDGI+R+HGLADVM GEMIE PG  + 
Sbjct: 2   QLNSTEISDLIKQRIEQFEVVSEARNEGTIVAVSDGIIRVHGLADVMQGEMIELPGNRYA 61

Query: 63  MALNLEQDSVGAVILGAYQSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDGKGPL 122
           +ALNLE+DSVGAV++G Y  LAEG   K TGRILEVPVG+ LLGRVV+ LG P+DGKGP+
Sbjct: 62  IALNLERDSVGAVVMGPYADLAEGQKVKTTGRILEVPVGRGLLGRVVNTLGQPIDGKGPI 121

Query: 123 GNTETDAVEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKTALAID 182
            N     VE +APGVI RKSVDQPVQTGYKAVD+MIP+GRGQREL+IGDRQ GKTALAID
Sbjct: 122 DNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDSMIPIGRGQRELVIGDRQTGKTALAID 181

Query: 183 AIINQKDSGIFCVYVAIGQKQSTIANVVRKLEENGALKNTIIVAASASESPALQYLAPYA 242
           AIINQKDSGI CVYVA+GQK STIANVVRKLEE+GAL NT++V A+ASE+ ALQYLAPY+
Sbjct: 182 AIINQKDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVATASEAAALQYLAPYS 241

Query: 243 GCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 302
           GC+MGE+FRDRGEDALIVYDDLSKQAVAYRQISLLL+RPPGREAYPGDVFYLHSRLLERA
Sbjct: 242 GCSMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERA 301

Query: 303 SRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFN 362
           SRV+ EYVEKFTNG V G+TGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE+ +FN
Sbjct: 302 SRVNAEYVEKFTNGEVKGQTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFN 361

Query: 363 SGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQL 422
           SG+RPAVN G+SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAF+QFASDLD+ATR QL
Sbjct: 362 SGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRAQL 421

Query: 423 EHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLTDVEIAKVGSFEQALIAYFNRDHAD 482
           EHG+RVTELMKQKQYAPMS+AD ++S++AAE+G+L  VE+ K+G FE +L++Y N +HAD
Sbjct: 422 EHGERVTELMKQKQYAPMSVADQSVSIFAAEKGYLKGVELNKIGDFEASLLSYMNSEHAD 481

Query: 483 LLAKINVKGDFNDEIDAGLKAGIEKFKATQTW 514
           L+  IN  GD+N +I+ GLKAG++KF  TQTW
Sbjct: 482 LMKTINETGDYNADIEGGLKAGLDKFVETQTW 513