Pairwise Alignments

Query, 514 a.a., ATP F0F1 synthase subunit alpha from Pseudomonas simiae WCS417

Subject, 513 a.a., ATP synthase F1, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  796 bits (2055), Expect = 0.0
 Identities = 401/512 (78%), Positives = 456/512 (89%)

Query: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLADVMSGEMIEFPGGVFG 62
           QLN +EIS++IK RI++ +V S++RNEGT+V+VSDGI+RIHGLADVM GEMIE PG  F 
Sbjct: 2   QLNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLADVMQGEMIELPGSRFA 61

Query: 63  MALNLEQDSVGAVILGAYQSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDGKGPL 122
           +ALNLE+DSVGAV++G Y  LAEG+  K TGRILEVPVG+ LLGRVV+ LG P+DGKG +
Sbjct: 62  IALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGAI 121

Query: 123 GNTETDAVEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKTALAID 182
            N     VE +APGVI RKSVDQPVQTGYKAVDAMIP+GRGQRELIIGDRQ GKTA+AID
Sbjct: 122 DNDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGKTAMAID 181

Query: 183 AIINQKDSGIFCVYVAIGQKQSTIANVVRKLEENGALKNTIIVAASASESPALQYLAPYA 242
           AIINQ+DSGI CVYVA+GQK STIANVVRKLEE+GAL NTI+V A+ASE+ ALQYLAPY+
Sbjct: 182 AIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQYLAPYS 241

Query: 243 GCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 302
           GC MGE+FRDRGEDALIVYDDLSKQAVAYRQISLLL+RPPGREAYPGDVFYLHSRLLERA
Sbjct: 242 GCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERA 301

Query: 303 SRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFN 362
           SRV+EEYVEKFT GAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE+ +FN
Sbjct: 302 SRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFN 361

Query: 363 SGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQL 422
           SG+RPAVN G+SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAF+QFASDLD+ATR QL
Sbjct: 362 SGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRAQL 421

Query: 423 EHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLTDVEIAKVGSFEQALIAYFNRDHAD 482
           EHG RVTELMKQKQYAPMS+A  A+S++AAE+G+L  VE+ KVG FE AL++Y N +HA 
Sbjct: 422 EHGVRVTELMKQKQYAPMSVAAQAVSIFAAEKGYLKGVELKKVGDFEAALLSYMNSEHAA 481

Query: 483 LLAKINVKGDFNDEIDAGLKAGIEKFKATQTW 514
           L+  IN  GD+N +I+A LKAG++KF ATQTW
Sbjct: 482 LIKLINETGDYNADIEAELKAGLDKFVATQTW 513