Pairwise Alignments

Query, 500 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

Subject, 537 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  400 bits (1027), Expect = e-116
 Identities = 227/430 (52%), Positives = 286/430 (66%), Gaps = 5/430 (1%)

Query: 72  VRLNNRLRGLIDNVHASQQLLAADPKVRLAAAQTLQKSAQPAQLKFLDQRVAAETDEGVH 131
           +R+NN +R  +     S  LL+ D   RL AAQ++ +S     L  ++  +AAE D  V 
Sbjct: 111 IRVNNSVRRAVRTALGSLTLLSPDRNQRLRAAQSVLQSPDADALGVIENALAAEKDGAVR 170

Query: 132 TALSLALANLQLVDTDPVV-RLAAVRLLGSTGDPLARTRLEALLAPGVETDAAVHTAAET 190
             L  A A + L+   PV  +  AVRLL   G   A   L A L      D ++    E 
Sbjct: 171 AVLEQARATMLLLSDRPVEEKKEAVRLLEENGGREALPILSAALG---SADESLKPDIEA 227

Query: 191 SLAQVKRKLLVGEILGQAFSGMSLGSILLLAALGLAITFGLLGVINMAHGEMLMLGAYST 250
           +LA +++           + G+SLGS+LLLAA+GLAITFG++G+INMAHGEM+MLGAY+T
Sbjct: 228 ALASIEQAQAFWNAGQNIWYGLSLGSVLLLAAIGLAITFGVMGIINMAHGEMVMLGAYTT 287

Query: 251 YMVQLLMQRYMPQAIEFYPLIALPVAFFVTAAIGMALERTVIRHLYGRPLETLLATWGIS 310
           ++VQ +++   P   E+   IALP+AF VT A+G+ALER VIR LYGRPLETLLATWGIS
Sbjct: 288 FLVQDVVRTSFPHLFEWSLAIALPLAFLVTGAVGLALERGVIRFLYGRPLETLLATWGIS 347

Query: 311 LMLIQLVRLVFGAQNVEVSNPEWLSGGVQVLPNLVLPYNRIVIIAFALCVVVLTWLLLNK 370
           L+L Q VR +FG  N EV NP W+SG  + L  L + +NR+ II FAL V      LL K
Sbjct: 348 LILQQTVRTIFGPTNREVGNPSWMSGAFE-LGGLAITWNRLWIIVFALAVFAALLFLLKK 406

Query: 371 TRLGLNVRAVTQNRNMAACCGVPTGRVDMLAFGLGSGIAGLGGVALSQIGNVGPDLGQSY 430
           T +GL +RAVTQNR MA+  G+ T  VD L F LGSGIAG+ GVALSQI NV P+LGQ Y
Sbjct: 407 TPMGLQMRAVTQNRRMASSMGIRTPWVDALTFALGSGIAGIAGVALSQIDNVSPNLGQGY 466

Query: 431 IIDSFLVVVLGGVGQLAGSVMAAFGLGIANKILEPQIGAVLGKILILALIILFIQKRPQG 490
           IIDSF+VVV GGVG L G+++ AF LGI NK LEP  GAVLGKIL+L LIILFIQKRP+G
Sbjct: 467 IIDSFMVVVFGGVGNLWGTLVGAFSLGILNKFLEPYAGAVLGKILVLVLIILFIQKRPRG 526

Query: 491 LFALKGRVID 500
           LFALKGR ++
Sbjct: 527 LFALKGRAVE 536