Pairwise Alignments

Query, 765 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (408), Expect = 1e-43
 Identities = 159/572 (27%), Positives = 259/572 (45%), Gaps = 71/572 (12%)

Query: 47  LLRMTLADDGQYRLWLPLERISPSLVEALLLKEDRNFYWHPGINPPALVRAAMATYSGGQ 106
           L+ M   D  + RL+L  ++    LV+ALL+ EDR+FY H G++P A+ RA +     G+
Sbjct: 168 LMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVVNLKAGR 227

Query: 107 R-QGGSTLSMQLARRLWDLNTRQVPGKLQQMALALWLEARYSKHDILEAYLNLAPMGGN- 164
             QGGSTL+ QLA+ ++  + R +  KL++  +AL ++ RYSK  ILEAYLN   +G + 
Sbjct: 228 TVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEVYLGQSG 287

Query: 165 ---IEGAEAASRIYFGKSAAQLSLSEALALAVIPQQPGRRARFGPS--LQHARQRLMADW 219
              I G   ASR+YFG+   +L + +   L  + + P   + + P    + AR+R     
Sbjct: 288 ADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGP---SYYNPMRYAERARERRDLVL 344

Query: 220 RETYPQD----PRNDSLLDLPLEARNRQQIPFLAPHLSEQL-----------LASQPGNE 264
           +     D    P     +  PL+ +   QI    P   +Q+             +  G  
Sbjct: 345 KLMMEHDILTAPEYQQAVTRPLDVQKTAQIASRQPAYFQQVSIELKEKLGDKFKADSGLR 404

Query: 265 LNSTLNLPLQHLLERLISGFIAERRSTGVEN--ATAILIDSRDQSVKALVGSADYLSTRL 322
           + ++L+   Q  LE+ I   I +   T  ++  A AI +D     ++A+VG      T  
Sbjct: 405 VFTSLDPVSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGK---RTGY 461

Query: 323 HGQVNGVLSRRSPGSTLKPFLYGLALDQGVIHP-----MSILKDLP-----SNFGYFQPE 372
            G    + + R  GS +KP +Y  AL     HP      + L+D P     S    + P 
Sbjct: 462 DGFNRVLNASRQIGSLVKPAVYLTAL----AHPDQYNLATTLEDKPLTLKGSEGSAWTPR 517

Query: 373 NFDGSFVGPLTARDALIRSRNIPAVWLASQVKSPSLYGLLQRAGIKGLRDESHYGLALAL 432
           N+D  + G +    AL +S N+P V L  ++    +   L + G+   RDE     ++ L
Sbjct: 518 NYDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVN--RDEIRPVPSMLL 575

Query: 433 GGGEMTPEELARLYVMLAGDGHLRPLRYLQEQPQSTG----------AQLLTPQAAFMVR 482
           G   +TP ++A++Y  L   G   PL  L+      G          +Q +  QAA++  
Sbjct: 576 GSFSLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYESLPRVSQAVDQQAAWLTT 635

Query: 483 DMLRRNPRPDGLPGRHWRT-------AWKTGTSWGFHDAWSAGLVGPYVLVVWVGNFDGR 535
             +++  +     GR+          A KTGT+    D+W  G+ G  V  +W+G  D +
Sbjct: 636 YAMKQGVQEG--TGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQ 693

Query: 536 PNPAFIGAKTAAPLF-----FRIADALPLALP 562
           P     GA  A  ++     +RI + L L  P
Sbjct: 694 PT-KLTGASGALRVYAQYLKYRIPEKLQLPWP 724