Pairwise Alignments

Query, 765 a.a., penicillin-binding protein from Pseudomonas simiae WCS417

Subject, 713 a.a., bifunctional penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  287 bits (734), Expect = 2e-81
 Identities = 207/563 (36%), Positives = 289/563 (51%), Gaps = 27/563 (4%)

Query: 29  PLEQAVTSSRVVLADDGSLLRMTLADDGQYRLWLPLERISPSLVEALLLKEDRNFYWHPG 88
           PL +A T S  VL  DG LLR   A DG +RL    + + P  +E L+  ED+ F  H G
Sbjct: 54  PLSEADTVSAEVLDRDGRLLRAFAAKDGLWRLKTTAQDVDPRFIEMLIAYEDQRFREHHG 113

Query: 89  INPPALVRAAMATYSGGQR-QGGSTLSMQLARRLWDLNTRQVPGKLQQMALALWLEARYS 147
           ++P AL RAA+   + G+   G STLSMQ+AR +     R +  KL Q+A A+ +E R  
Sbjct: 114 VDPLALARAALQFVTNGRIVSGASTLSMQVARLIEPRERRTLGAKLLQVARAIQIERRLG 173

Query: 148 KHDILEAYLNLAPMGGNIEGAEAASRIYFGKSAAQLSLSEALALAVIPQQPGRRA--RFG 205
           K +IL+ YL  AP GGN+EG  AAS  +FGK   +LS  EA  L  +PQ P +R   R  
Sbjct: 174 KDEILDLYLTHAPYGGNLEGVRAASLAWFGKEPRRLSAGEAALLVALPQLPEKRRPDRNL 233

Query: 206 PSLQHARQRLMADW---RETYPQDPRNDSLLDLPLEARNRQQIPFLAPHLSEQLLASQPG 262
            + + AR+R++A     R     +    ++  +P     R Q+P  A HL+E      P 
Sbjct: 234 AAAEAARKRVLARAAVARVIGEGEAERAAMTAIPTR---RLQLPAHAAHLAEAARRKDPA 290

Query: 263 NELNSTLNLPLQHLLERLISGFIAE--RRSTGVENATAILIDSRDQSVKALVGSADYLST 320
              + T    L   ++R + G   E   R     +   ++ D R   +   VGSADY   
Sbjct: 291 GRRHPTT---LSRNIQRSLEGVAREGAARLGPKVSVAMVMADIRTGEIVGEVGSADYFDA 347

Query: 321 RLHGQVNGVLSRRSPGSTLKPFLYGLALDQGVIHPMSILKDLPSNFGYFQPENFDGSFVG 380
              G ++     RSPGSTLKPF+YGLA ++G++   +I++D P++F  ++P NFD ++ G
Sbjct: 348 SRSGWIDMSRITRSPGSTLKPFIYGLAFEEGLVSQETIIEDRPADFFGYRPRNFDMNYQG 407

Query: 381 PLTARDALIRSRNIPAVWLASQVKSPSLYGLLQRAGIK-GLRDESHYGLALALGGGEMTP 439
            +T R AL  S N+PA+ L   V    L    +RA ++  L      GLA+ LGG  +T 
Sbjct: 408 DVTVRQALQLSLNVPAIRLLDAVGPSRLMVRFRRADVRPKLPPHEAPGLAIGLGGVGITL 467

Query: 440 EELARLYVMLAGDGHLRPLRY---LQEQPQST-GAQLLTPQAAFMVRDMLRRNPRPDGLP 495
            EL +LY  LA  G   P+R    ++  P  T G  LL+  AA+ V D+L     P G  
Sbjct: 468 HELVQLYAGLANQGW--PVRLGDGIEGVPGPTDGEPLLSTVAAWHVADILSDVLPPAG-- 523

Query: 496 GRHWRTAWKTGTSWGFHDAWSAGLVGPYVLVVWVGNFDGRPNPAFIGAKTAAPLFFRIAD 555
            R    A+KTGTS+G+ DAWS G  G YVL VWVG  D    P   G   AAP+ F    
Sbjct: 524 SRRHGIAYKTGTSYGYRDAWSVGFDGRYVLGVWVGRPDNGAVPGLTGYGAAAPILFEGFA 583

Query: 556 ALPLALPNVVIKADKPPAGLVRI 578
              +A    +     PPAG VR+
Sbjct: 584 KAGIA----ITPLPGPPAGAVRL 602



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 22/83 (26%), Positives = 28/83 (33%)

Query: 674 SDQSEAPQIRSPLTQVSYQLRLSQPQESIPLNANAASDAATLYWFADQTLIGQGPPHTTL 733
           S +  APQI  P      +L         PL        A   W A+   +         
Sbjct: 625 SVREAAPQIVFPPEGARVELGAQGDGVITPLTLKLQGGRAPFRWLANGRPLPDVARRRVS 684

Query: 734 NWRPGKSGEYRLRVSDDQGRSAS 756
            W+P   G   L V D  GR+AS
Sbjct: 685 QWQPDGGGYSTLTVIDALGRAAS 707