Pairwise Alignments

Query, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 391 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  407 bits (1045), Expect = e-118
 Identities = 203/347 (58%), Positives = 255/347 (73%), Gaps = 7/347 (2%)

Query: 12  KAGPKVTIALGALILIVLLALPLLSLLP-PDNAFHISAYTLTLVGKILCYAIVALALDLV 70
           K+  +  +   A++L + + +P L+LL  P++  H+  Y ++L GK L YA++ALALDLV
Sbjct: 8   KSLDRTIVVAVAILLALAVIVPALNLLTAPEHPLHVPTYLVSLFGKYLTYALLALALDLV 67

Query: 71  WGYAGMLSLGHGLFFALGGYAMGMYLMRQ--ASGDE----LPAFMTFLSWTELPWYWVGT 124
           WG+ G+LSLGH  FFALGGYAMGMYLMRQ  A G      LP FM FL+W ELPW+W G 
Sbjct: 68  WGFCGILSLGHAAFFALGGYAMGMYLMRQIGARGSYGNPLLPDFMVFLNWKELPWFWYGF 127

Query: 125 QHFVWAMCLVVLAPGLLALVFGFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFGGN 184
             F +A  +VVL PGLLA VFG+FAFRSR+ GVY SI+TQA+T+A +L FFRN+ GFGGN
Sbjct: 128 DMFWFAALMVVLVPGLLAFVFGWFAFRSRVNGVYLSIITQAMTYALLLAFFRNDMGFGGN 187

Query: 185 NGFTNFRSILGFGITEPGTRAVLFVATVALLVASLFIGWRLARSKFGRVLTALRDAENRL 244
           NG T+F+ ILGF I   GTRA LF A+   L  SL +   + RSKFG+VL ALRDAE+R 
Sbjct: 188 NGLTDFKDILGFNIQADGTRAALFAASALALAVSLVVTSGIVRSKFGKVLVALRDAESRT 247

Query: 245 MFCGYDPRGFKLFVWVLSAVLCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGT 304
            F GY     KLF + +SA++ G+AGALYVPQVGIINP E +P NSIE  +W A+GGRGT
Sbjct: 248 RFLGYRVEHMKLFAFTVSAMMAGVAGALYVPQVGIINPGEFAPANSIEVVIWTAVGGRGT 307

Query: 305 LIGPLLGAGVVNGMKSWFTVAFPEYWLFFLGALFIIVTLYLPKGVIG 351
           LIGP++GA +VNG KS FT AFPE+WLF LG LF++VTL+LPKGV+G
Sbjct: 308 LIGPIVGAILVNGGKSIFTAAFPEFWLFALGGLFVLVTLFLPKGVVG 354