Pairwise Alignments

Query, 355 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

Subject, 314 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (331), Expect = 2e-35
 Identities = 103/327 (31%), Positives = 156/327 (47%), Gaps = 36/327 (11%)

Query: 26  LIVLLALPLLSLLPPDNAFHISAYTLTLVGKILCYAIVALALDLVWGYAGMLSLGHGLFF 85
           L+  LAL L  ++ P        Y + L+ K+LC+A+ A A +L+ GY G+LS GH  FF
Sbjct: 7   LLPWLALGLALIVAP-----FFVYPVFLM-KVLCFALFACAFNLLLGYVGLLSFGHAAFF 60

Query: 86  ALGGYAMGMYLMRQASGDELPAFMTFLSWTELPWYWVGTQHFVWAMCLVVLAPGLLALVF 145
               Y     L     G                         + A+ L  L  G+L L F
Sbjct: 61  GFAAYVSAHALKVWELGP------------------------LQAVALGTLTAGVLGLGF 96

Query: 146 GFFAFRSRIKGVYFSIMTQALTFAGMLLFFRNETGFG-GNNGFTNFRSILGFGITEPGTR 204
           G+ A R +  G+YF+++T AL  A M+ F   +  F  G +G         FG+ +    
Sbjct: 97  GWLAIRRQ--GIYFAMVTLAL--AQMIYFLCLQAAFTHGEDGIQAVPRPPVFGLIDVSDP 152

Query: 205 AVLFVATVALLVASLFIGWRLARSKFGRVLTALRDAENRLMFCGYDPRGFKLFVWVLSAV 264
             L+   +AL V    +  R   S FG+VLTA+R+ E R +  GYD   +KL  +VLSA 
Sbjct: 153 GRLYWLVLALTVLGFLVIARAIHSPFGQVLTAIRENEPRAISLGYDVDRYKLVAFVLSAA 212

Query: 265 LCGLAGALYVPQVGIINPSEMSPTNSIEAAVWVALGGRGTLIGPLLGAGVVNGMKSWFTV 324
           L G AGA+ V    + + +++    S E  +   +GG GTL GPL+GA VV G+++ F  
Sbjct: 213 LAGFAGAIKVMVFQLASLTDVHWHMSGEVVLMTLIGGVGTLAGPLVGAAVVVGIQNVF-A 271

Query: 325 AFPEYWLFFLGALFIIVTLYLPKGVIG 351
           +F  +     G +F+   L   +G++G
Sbjct: 272 SFGAWVTIIQGVIFVACVLLFRRGIMG 298