Pairwise Alignments

Query, 400 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 281 a.a., N-acetylmuramoyl-L-alanine amidase AmiA from Pantoea sp. MT58

 Score =  206 bits (523), Expect = 9e-58
 Identities = 113/265 (42%), Positives = 161/265 (60%), Gaps = 11/265 (4%)

Query: 125 LVLDLTSATQAPRQIAAEPKPLVDK------AHPKRD--IIVVVDPGHGGKDPGAVGSKG 176
           L+  L  A   PR + A+ K L         A P ++   IV++DPGHGG D GAVG +G
Sbjct: 14  LLSGLALAILTPRAVQAKEKTLTGANPHTRPAPPAKNGKRIVMIDPGHGGIDSGAVGEEG 73

Query: 177 QREKDVVLSIAQLLAKRLKREKGFDVKLVRNDDFFVPLRKRVEIAHKHNADMFISVHADA 236
             EK +VL IA  + ++L+     +V+L R+ D F+PL +RVEIAH+H AD+F+S+HAD 
Sbjct: 74  SEEKHIVLEIAGNVQRQLQSHPRIEVRLTRDSDHFIPLYQRVEIAHQHGADLFMSIHADG 133

Query: 237 APRVTASGASVYALSEGGATSATARFMAQRENGADLLGATRLLNLKDKDPMLAGVILDMS 296
                ASGASV+ALS  GA+S+ AR+++QREN AD LG  +    + +D  L  ++ D+ 
Sbjct: 134 FTSPDASGASVFALSNRGASSSMARYLSQRENDADKLGGVK---AQQQDHYLQQILFDLV 190

Query: 297 MNATIASSLQLGNSILGSLEGITSLHQRRVEQAGFAVLKSPDVPSILVETGFISNARDSA 356
              TI +SL LG  +L  +  +  LH +  EQA FAVLKSP +PS+LVET FI+N R+  
Sbjct: 191 QTDTIKNSLTLGKHVLDQIRPVHHLHSQHTEQAAFAVLKSPSIPSVLVETSFITNPREEQ 250

Query: 357 RLVTARHQQAVADGLFEGLKKYFQK 381
            L T   +Q +A  +  G+  YF +
Sbjct: 251 LLGTTAFRQKIASAIASGIVNYFDE 275