Pairwise Alignments

Query, 400 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas simiae WCS417

Subject, 501 a.a., N-acetylmuramoyl-L-alanine amidase from Cupriavidus basilensis FW507-4G11

 Score =  234 bits (597), Expect = 4e-66
 Identities = 119/250 (47%), Positives = 163/250 (65%), Gaps = 3/250 (1%)

Query: 136 PRQIAAEPKPLVDKAHPKRDIIVVVDPGHGGKDPGAVGSKGQREKDVVLSIAQLLAKRLK 195
           P  + A   P       +R + V +DPGHGG+DPGA G+ G REKDVVL IAQ L  ++ 
Sbjct: 249 PAALPANNPPADRSFKMRRLLTVAIDPGHGGEDPGATGASGSREKDVVLQIAQRLRAKID 308

Query: 196 REKGFDVKLVRNDDFFVPLRKRVEIAHKHNADMFISVHADAAPRVTASGASVYALSEGGA 255
            +      + R+ DFFVPL  RV+ A +  AD+F+S+HADA     A GASV+ALSE GA
Sbjct: 309 SQPNMRAMMTRDADFFVPLNVRVQKARRVQADLFVSIHADAFLSPEAKGASVFALSERGA 368

Query: 256 TSATARFMAQRENGADLLGATRLLNLKDKDPMLAGVILDMSMNATIASSLQLGNSILGSL 315
           +S  AR+MA +EN +DL+G     N+ +KD  +A V+LD+S  A I  SLQ+G ++L  +
Sbjct: 369 SSTAARWMANKENASDLIGGA---NMGNKDAQVARVLLDLSTTAQINDSLQVGKAVLAEI 425

Query: 316 EGITSLHQRRVEQAGFAVLKSPDVPSILVETGFISNARDSARLVTARHQQAVADGLFEGL 375
            G+  LH+  VEQAGFAVLK+PD+PSILVET FISN  +  +L    HQ+ +A+ +  G+
Sbjct: 426 GGVNRLHKGSVEQAGFAVLKAPDIPSILVETAFISNPEEERKLNDESHQEQLANAILRGI 485

Query: 376 KKYFQKNPPM 385
           K YF +NPP+
Sbjct: 486 KNYFARNPPL 495



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 6/131 (4%)

Query: 5   QLLNLLLASPLFTL--PFAAHATQISNARLWRSDEKLRLVFDLSGPVQYKTFTLSAPERL 62
           Q L     S + TL  P  A    I   R+W ++E  R+  +   P+      +  P+RL
Sbjct: 24  QCLKAGAGSVVLTLAGPQIAFGAGIVAVRVWPAEEYTRVTIESDEPLAAVHQMIHGPDRL 83

Query: 63  IIDLSGAGLSGDFSQLALKNSG----ITSIRSGHFGKGDTRIVLDLAAPMQLNSFLLPPQ 118
           ++D+ G  LS    +L  K +     I ++R G       R+V DL   +    F L P 
Sbjct: 84  VVDIDGLDLSPTLRELVAKITSNDPYIQTVRVGQNRPRVVRLVFDLKENVSPQVFTLAPI 143

Query: 119 DGQGHRLVLDL 129
               +RLV DL
Sbjct: 144 GSYRNRLVFDL 154