Pairwise Alignments

Query, 320 a.a., cobalamin biosynthesis protein CobW from Pseudomonas simiae WCS417

Subject, 329 a.a., GTP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  163 bits (413), Expect = 5e-45
 Identities = 107/313 (34%), Positives = 166/313 (53%), Gaps = 13/313 (4%)

Query: 1   MLQNIPTHVIAGPLGAGKTSLIKHLLAQRPANERWAVLINEFGQIGLDAALLTQDDDGIA 60
           M+  +PT++I G LG GKT+ I HLLA +PA+E+WAVL+NEFG+IG+D A+++  + G  
Sbjct: 1   MINRVPTNIITGFLGVGKTTAILHLLATKPAHEKWAVLVNEFGEIGIDGAIMS--EQGAM 58

Query: 61  LGEVAGGCLCCVNGAPFQVGLGRLLRKAKPDRLLIEPSGLGHPAQLLKQLRQAPWQDVLS 120
           + EV GGCLCC  G P  VG+  LLR+ KPDRL+IEP+GLGHP Q++  L    +Q  + 
Sbjct: 59  IKEVPGGCLCCTAGVPMSVGINALLRQ-KPDRLIIEPTGLGHPKQVVATLISEQYQPYVD 117

Query: 121 VQPCVVVLDAQALAAGKPLPPSQ-QAALASAGLLVLNK-----DEGLDAGQRRAIERQLP 174
           ++  + ++D + L+  K          LASA +++ NK        +DA      ++   
Sbjct: 118 LKATIALMDPRHLSMDKYRSNQNFNDQLASADIVLGNKVDQCSSSDIDAFNDWVTDQTPA 177

Query: 175 ECPLYWTRQAQLPLD--QLPGLNAQASAAVDKVEVPEGLAQMPAIWGDPTQPICLSQAQ- 231
           +      +Q Q P++   +P L   AS  +D        A  P     P QP    + + 
Sbjct: 178 KTFSQLIKQGQFPIELLDMPRLVGHASTHIDS-HHHHHAADEPQFQLAPQQPFLRKENRG 236

Query: 232 EGGWSVGWRWHPSQQFDTRRLHQWLTSLEWRRAKLVIHSAEGWVSTNAVDNSELTWQASE 291
           +G +S GW +    QF+   L Q L  L   R K V+++  G  + N  +      + S 
Sbjct: 237 QGYFSCGWLFGAEYQFNFDLLFQLLNDLTAERVKGVLNTDRGCYAFNVANGVVSVTEMSL 296

Query: 292 WRRDSRIELIFSE 304
              +SR+E+I S+
Sbjct: 297 DGFESRLEVIDSQ 309