Pairwise Alignments

Query, 273 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 67/268 (25%), Positives = 119/268 (44%), Gaps = 35/268 (13%)

Query: 6   LLALGLTLLAASTQAFGGATLDRIEKNKELVGVLMESYPPFSFLNEQNQLDGFDVDVAKA 65
           LLA  + L++AS  A            +E+  V+  +Y PF +++E NQ+ GFDVD+A A
Sbjct: 5   LLASLIGLVSASAAA-----------QQEIKFVMEATYAPFEYMDENNQIQGFDVDLANA 53

Query: 66  VAQKLGVKLRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVV 125
           + ++L  K      ++D +       RYD  I +M  ++AR E  +F   YY + A  V 
Sbjct: 54  LCKQLEAKCSFHNQAFDSLIPALKFKRYDAAISAMDITEARLEQVNFSNPYYDNSAAFVS 113

Query: 126 NAKDDRIHSAKDLSGKKVGLTSASSYESYLNKNLVIEGAEDTQLQYPFEDVQIAPYDTDN 185
            A   ++     L GK+VG+ + S+++S+L + L               DV   PY +  
Sbjct: 114 LA--GKVADQAALKGKRVGVQNGSTHQSFLLEQL--------------SDVVAVPYSSYQ 157

Query: 186 VAFQDLGLGAGVRLDAILTNLVTAQPRLTQDKRFKLAGEPL-----YSEPNSVAIEKGDP 240
            AF D+  G   R+D++  +          D      GE +     +     +A+ K + 
Sbjct: 158 DAFIDMKNG---RIDSVFGDTAVVAEWFKGDNNLAYVGERVTNAQYFGNGFGIAVNKDNQ 214

Query: 241 QWDSKVREVFAQLKQDGTLSKLSQKWIG 268
               ++      +K++G  + +  K+ G
Sbjct: 215 ALLDQLNAALEAVKENGEYAAIFNKYFG 242