Pairwise Alignments

Query, 273 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 248 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 26/264 (9%)

Query: 14  LAASTQAFGGATLDRIEKNKELVGVLMESYPPFSFLNEQNQLDGFDVDVAKAVAQKLGVK 73
           +A +  A   AT+    + K  VG +   Y PF+F+ +Q++L GF+VDV   + ++   K
Sbjct: 7   IALAALALSSATVQAATEVK--VG-MSGRYFPFTFV-KQDELQGFEVDVWNEIGKRNDYK 62

Query: 74  LRLETPSWDVIAAGRWSGRYDICICSMTPSKARAEVFDFPVEYYASPAVIVVNAKDDRIH 133
           +   T ++  +     +GR D     +T + AR   + F   Y    A I V   ++ I 
Sbjct: 63  VEFVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGNEAIK 122

Query: 134 SAKDLSGKKVGLTSASSYESYLNKNLVIEGAEDTQLQYPFEDVQIAPYDTDNVAFQDLGL 193
              DL+GK V +   S++E  L +N   +G            + I  YDT      D+ L
Sbjct: 123 GIDDLAGKTVAVNLGSNFEQLL-RNHDKDG-----------KINIKTYDTG--IEHDVAL 168

Query: 194 GAGVRLDAILTNLVTAQPRLTQ-DKRFKLAGEPLYSEPNS---VAIEKGDPQWDSKVREV 249
           G   R DA + + ++A   + +     +LAG P  +  N+   V  EKG  Q   +V + 
Sbjct: 169 G---RADAFVMDRLSALELIEKTGLPLQLAGSPFETIENAWPFVNNEKGQ-QLQGEVNKA 224

Query: 250 FAQLKQDGTLSKLSQKWIGADISQ 273
            A ++ DGTLS+++ KW G DISQ
Sbjct: 225 LAAMRADGTLSQIALKWFGTDISQ 248