Pairwise Alignments

Query, 344 a.a., acetylpolyamine aminohydrolase from Pseudomonas simiae WCS417

Subject, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 74/275 (26%), Positives = 107/275 (38%), Gaps = 55/275 (20%)

Query: 56  LAPLQRIHSRDYLEFFKGAWARWTEFATDGALLPYTWPARTLRRVLPTSLHGQLGYYSFD 115
           L+ + R+H  DY++                ALL  T  A  +RR+             F 
Sbjct: 57  LSRITRLHDPDYVQ----------------ALLEGTLSAAKMRRI------------GFP 88

Query: 116 GGAPITAGTWQAAYSAAQVALTAQQAIQQGAHSAFALCRPPG-HHAASDLMGGYCYLNNA 174
              P+   T    YS     LT +QA+Q G     A+    G HHA +D   G+C  N+ 
Sbjct: 89  WSKPLIERT---LYSVGGTCLTVEQALQSGV----AIHLSGGYHHAHADFGSGFCLFNDL 141

Query: 175 AIAAQAFLD-QGHKKVAILDVDYHHGNGTQSIFYARRDVLFTSIHGHPEAEFPFFLGYAD 233
           AIAA   L      KV I+D D HHG+GT ++   R +++  S   H +  FP       
Sbjct: 142 AIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSF--HCDKNFP------- 192

Query: 234 ELGEGPGEGFNFNYPLPAGSGWERWSAALEEACKEIERYGADIIIVSLGVDTFKDD---- 289
                P    +  Y    G   E  S  ++     +  +  D+I+   GVD   DD    
Sbjct: 193 --ARKPASSMDVGYANQTGDE-EFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGY 249

Query: 290 -PISQFKLDSPDYLAMGARIADLGKPTLFVMEGGY 323
             ISQ  +   D   +G    +   P   V+ GGY
Sbjct: 250 LSISQAAIAQRDRFMLGLAKQE-SIPIACVIGGGY 283