Pairwise Alignments

Query, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

Subject, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  448 bits (1153), Expect = e-130
 Identities = 223/471 (47%), Positives = 321/471 (68%), Gaps = 9/471 (1%)

Query: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQA 60
           ++ ++ND L G +L+ L+VG+G YFT+R  F+Q RHF H F+V K+S K+    +SSFQA
Sbjct: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63

Query: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEG 120
           L  SLA RVG GN+AGV +A+T GGPGA+FWMW+ A++GM++SF E +L QLYK  D +G
Sbjct: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123

Query: 121 TYRGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFGLDTTYTGL 180
            YRGGPAYY++ GL  RW+G++ +  L++ FG  FN +QA+++T+++  AFG +    G+
Sbjct: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183

Query: 181 ALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATIVKSAFG 240
            + +L   V  GGI++IA  A+L+VP     Y+A+ L+V+V+ ++ VP  ++ I KSAFG
Sbjct: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243

Query: 241 LDQAFGGLVGSAI----IMGVKRGVFANEAGLGSAPNVAAVAS--VEHPIAQGVVQAFSV 294
           L +A  G +G AI    I GVKRG+F+NEAG+GSAPN AA A+    HP +QG VQ   V
Sbjct: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303

Query: 295 FLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGDWGRMFISVALALFVFTS 354
           F+DT VICT T  +IL+SG Y P  E  GI LTQ +L++ VGDWG +FI+ A+  F FTS
Sbjct: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363

Query: 355 IMYNYYLGESNLRFLVGNNRKVLMGYRALVLVLIFWGSIENLSTVFAFADITMTMLAFVN 414
           I+ NY   E+NL FL  NN+K L+ +R + L ++ +GS+  L TV+A AD++M ++A VN
Sbjct: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423

Query: 415 LFALAFLFKIAMRILNDYDNQRAAGIKTPVFDSSQFPDL--DLDRKAWPAN 463
           L A+  L  I +++  DY+ Q  AG K P FD++ +P+L   L+   W  N
Sbjct: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLEDGIWDNN 473