Pairwise Alignments

Query, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

Subject, 516 a.a., alanine:cation symporter family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  324 bits (830), Expect = 5e-93
 Identities = 182/478 (38%), Positives = 288/478 (60%), Gaps = 45/478 (9%)

Query: 7   DFLSGKV----LIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQALM 62
           DFL+G +    LI L +G G ++++ +RFVQ+RHFF M+ +  ++ +SS G +SSFQAL 
Sbjct: 6   DFLNGIIWSPALIYLCLGAGLFYSVLTRFVQVRHFFEMWRLLLNNKESSKG-ISSFQALA 64

Query: 63  LSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEGTY 122
           +SL+GRVG GNIAGV  A+  GGPGAVFWMW+ A  G ++++ E +L Q+YK  D  G +
Sbjct: 65  VSLSGRVGTGNIAGVAAAIGFGGPGAVFWMWMVAFFGAATAYAESTLAQIYKEED-NGEF 123

Query: 123 RGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFG----LDTT-- 176
           RGGPAYYI+  + ++W   V A   +   G    G+Q++++ +++ +AFG    ++T   
Sbjct: 124 RGGPAYYIEKAMGQKWYAWVFAIATIFACGVLLPGVQSNSIGNAVESAFGSGPMIETALG 183

Query: 177 -------YTGLALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPA 229
                  +TG  +++LLG +  GG+KRIAS   ++VP   L YI     +I+L    VP 
Sbjct: 184 TFSFAKIFTGTVISILLGFIIFGGVKRIASFTQIVVPFMALAYIITAFVIILLNIGEVPR 243

Query: 230 MLATIVKSAFGLDQAFGGLVGSAIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVV 289
           ++A IV  AF       G VG+AI  GVKRGV++NEAG G+ P+ AA ASVEHP  QG+V
Sbjct: 244 IIAMIVGDAFS---PMAG-VGAAIGWGVKRGVYSNEAGQGTGPHAAAAASVEHPAQQGLV 299

Query: 290 QAFSVFLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGD------------ 337
           Q+FS+++DT ++C+ TA +IL++G Y      +G+ L QN  A ++              
Sbjct: 300 QSFSIYIDTLMVCSATAFMILITGAYNVHGAAEGMFLVQNLPADIIASSPAFTQIAVDSA 359

Query: 338 ---WGRMFISVALALFVFTSIMYNYYLGESNLRFLVGNNRKV--LMGYRALVLVL-IFWG 391
               G+ F++ AL  F FT+I+  YY+ E+N+ + +    KV  LM    LVL+  +F+G
Sbjct: 360 LPGIGKPFVAFALFFFAFTTILAYYYIAETNVAY-IRRTFKVDGLMFVLKLVLMASVFYG 418

Query: 392 SIENLSTVFAFADITMTMLAFVNLFALAFLF---KIAMRILNDYDNQRAAGIKTPVFD 446
           +++  +  +A  D+ + ++A++N+  +  +F   K  M  L DY++Q+  G+    F+
Sbjct: 419 TVKTANLAWALGDVGVGLMAWLNIVGIIIIFFMSKPTMAALKDYEDQQKQGVTEFTFN 476