Pairwise Alignments

Query, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

Subject, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

 Score =  278 bits (712), Expect = 2e-79
 Identities = 155/429 (36%), Positives = 235/429 (54%), Gaps = 11/429 (2%)

Query: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVF--KDSLKSSAGQLSSF 58
           ++  +N F+ G  ++VL++G G + T+R  F+Q+    +   +   K   ++S G +S F
Sbjct: 6   LVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGDISHF 65

Query: 59  QALMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDA 118
           QALM +LA  +G GNIAGV  A  LGGPGA+FWMWVTA  GM++ + E  L   Y+  D 
Sbjct: 66  QALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRTVDD 125

Query: 119 EGTYRGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGL----QAHAVTHSLNNAFGLD 174
            G   GGP Y+++ GL    LG ++         FA  G+    Q ++V  ++ + FG+D
Sbjct: 126 NGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASNFGVD 185

Query: 175 TTYTGLALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATI 234
              TG  LA+    V +GGIK I     ++VP   + YI   L ++ +   ++     TI
Sbjct: 186 PLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPAFGTI 245

Query: 235 VKSAFGLDQAFGGLVGSAIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVVQAFSV 294
             SAF     FG L+G+AI+ GVKRGVF+NEAGLGSAP  AA A  +HP  Q +V     
Sbjct: 246 FSSAFNFSAGFGALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAKTDHPGRQALVSMTGT 305

Query: 295 FLDTFVICTCTALLILLSGFYT-PGF-EGDGIALTQNSLAAVVGDWGRMFISVALALFVF 352
           FLDT V+CT T L++ ++G    PG  +  G +LT  S  A++   G + +++ L  F +
Sbjct: 306 FLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALM-PMGGLIVTIGLVFFAY 364

Query: 353 TSIMYNYYLGESNLRFLVGNNRKVLMGYRALVLVLIFWGSIENLSTVFAFADITMTMLAF 412
           ++++   Y GE    +L+G   K +  YR   +++ FWG+  +L  V+  AD     +A 
Sbjct: 365 STVLGWSYYGEKCFEYLIGT--KGIRLYRIAFVLVAFWGATASLPLVWNIADTLNGAMAI 422

Query: 413 VNLFALAFL 421
            NL  L  L
Sbjct: 423 PNLIGLLLL 431