Pairwise Alignments

Query, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

Subject, 495 a.a., sodium:alanine symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  364 bits (935), Expect = e-105
 Identities = 189/463 (40%), Positives = 288/463 (62%), Gaps = 23/463 (4%)

Query: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHFFHMFSVFKDSLKSSAGQLSSFQA 60
           ++  +N+ +    L+ L +G+G +F++RSRF+QLRH   M  +  D   + AG +SSFQA
Sbjct: 4   IVNAVNNIVWSPALVYLCLGVGLFFSLRSRFLQLRHLPEMIRLMFDGKSTDAG-VSSFQA 62

Query: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAEG 120
           L ++LAGRVG GNIAGV  A+T GGPGA+FWMW+ A +G SS+F+E +LGQ+YK     G
Sbjct: 63  LAMTLAGRVGTGNIAGVATAITFGGPGALFWMWMVAFLGASSAFVESTLGQVYKEK-ING 121

Query: 121 TYRGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGLQAHAVTHSLNNAFGLDTTYTGL 180
            YRGGPA+YI+ GL  +W     A   +   G    G+QA+++  SL  AF +D   T  
Sbjct: 122 EYRGGPAFYIEKGLGMKWYAWTFAIATIFACGVLLPGVQANSIGASLKTAFDIDPNVTAA 181

Query: 181 ALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATIVKSAFG 240
            LA+LLG +  GG+KRIA+ A L+VP   L YI V   +I L  D +P +L  I+KSAFG
Sbjct: 182 VLAMLLGFIIFGGVKRIANFATLVVPFMALGYIIVACVIIALNIDQLPGILWLIIKSAFG 241

Query: 241 LDQAFGGLVGSAIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVVQAFSVFLDTFV 300
            D  FG ++G AI+ GVKRGV++NEAG G+ P+ ++ A+V HP  QG+VQAFSV++DT  
Sbjct: 242 FDAGFGAILGLAIMWGVKRGVYSNEAGQGTGPHASSAAAVTHPAKQGLVQAFSVYIDTLF 301

Query: 301 ICTCTALLILLSGFYT----------PGFEG--DGIALTQNSLAAVVGDWGRMFISVALA 348
           +C+ T  ++L++G Y            G  G   G    Q ++ +++  +G MF+++AL 
Sbjct: 302 VCSATGFMLLITGLYNVQGPDGAALYTGIAGVAAGSGYVQTAMESMMPGFGNMFVAIALF 361

Query: 349 LFVFTSIMYNYYLGESNLRFLVGNNRKVLMGYRALVLVLIF-----WGSIENLSTVFAFA 403
            F FT+I+  YY+ E+N+ ++   NRKV   +  ++L +I      +G+++     +   
Sbjct: 362 FFAFTTIVAYYYIAETNIAYI---NRKVNRPWLTVMLKVIIMASTVYGTVKTADLAWGMG 418

Query: 404 DITMTMLAFVNLFALAFLFKIAMRILNDYDNQRAAGIKTPVFD 446
           DI + ++A++N+ A+  L K+A   L DY++Q+  GI+ P FD
Sbjct: 419 DIGVGIMAWLNIIAIILLQKVAFTCLKDYESQQKQGIE-PQFD 460