Pairwise Alignments

Query, 440 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 927 a.a., two-component sensor histidine kinase BarA from Vibrio cholerae E7946 ATCC 55056

 Score =  117 bits (294), Expect = 1e-30
 Identities = 75/251 (29%), Positives = 134/251 (53%), Gaps = 12/251 (4%)

Query: 198 RIHQLEQMRKDFVANVSHELRTPLTVICGYLETLLDNVDEINPRWSRALQQMQQQGSRMQ 257
           R  +  +++ +F+AN+SHELRTPL  + G+   +L    ++    +  LQ +++  + + 
Sbjct: 283 RAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKT--QLTNSQADYLQTIEKSANNLL 340

Query: 258 TLLNDLLLLAKLEATDYPSDNHPVAVQSLLQTIKNDALALSGQRGQQITLEADPNVL--L 315
           T++ND+L  +KLEA     +N P   Q +L+ + N     + ++G +ITL+ DP +   +
Sbjct: 341 TIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDPKIPRGV 400

Query: 316 KGSEGELRSAFSNLVFNAVKYTPDKGNIRIR-----WWTDEQGAHLSVQDSGIGIDAKHL 370
            G    ++   +NLV N++K+T ++GNI +         D       V+D+GIGI  +  
Sbjct: 401 VGDPLRIQQVLTNLVGNSIKFT-ERGNIDVSVEMRALRDDVIDLQFMVRDTGIGISERQQ 459

Query: 371 PRLTERFYRVDSSRNSNTGGTGLGLAIVKHVLLRHRARLEISSVLGHGST--FTCHFPPT 428
            +L + F + D+S +   GGTGLGL I + ++      + ++S L  GST  FT     T
Sbjct: 460 AQLFQAFSQADASISRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTT 519

Query: 429 QMTRSRGVTAD 439
           ++  + G  AD
Sbjct: 520 ELPLNDGYNAD 530