Pairwise Alignments

Query, 440 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  129 bits (324), Expect = 3e-34
 Identities = 71/229 (31%), Positives = 128/229 (55%), Gaps = 2/229 (0%)

Query: 199 IHQLEQMRKDFVANVSHELRTPLTVICGYLETLLDN-VDEINPRWSRALQQMQQQGSRMQ 257
           + +L++++ + +A VSHELRTPLT I GY+E +LD  +  IN    + LQ       R++
Sbjct: 406 LKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLR 465

Query: 258 TLLNDLLLLAKLEATDYPSDNHPVAVQSLLQTIKNDALALSGQRGQQITLEADPNVLLKG 317
            L+  +L L+K+E  +       V ++S++  +      L+ ++  ++  E + ++ ++ 
Sbjct: 466 RLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVE-DIAIEA 524

Query: 318 SEGELRSAFSNLVFNAVKYTPDKGNIRIRWWTDEQGAHLSVQDSGIGIDAKHLPRLTERF 377
            +  +    +NL+ NA+K++P   +I +    +++  HL V D G GI  K + ++  RF
Sbjct: 525 DKDRITQVLTNLIENAIKFSPANESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRF 584

Query: 378 YRVDSSRNSNTGGTGLGLAIVKHVLLRHRARLEISSVLGHGSTFTCHFP 426
           Y+VDSS     GG+GLGLA+ K ++  H+  + + S LG GSTF    P
Sbjct: 585 YQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHIILP 633