Pairwise Alignments

Query, 892 a.a., ATPase AAA from Pseudomonas simiae WCS417

Subject, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

 Score =  680 bits (1754), Expect = 0.0
 Identities = 388/894 (43%), Positives = 553/894 (61%), Gaps = 42/894 (4%)

Query: 1   MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF 60
           M  I    L  KLN+ +  A+E A   C  R +P V L ++   LL    SD+  +++Q 
Sbjct: 1   MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQA 60

Query: 61  NVEPARLARDLT------EALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRT 114
            +E  ++ + +       + LD  P  S  + +L       ++  W+  S    ++++R+
Sbjct: 61  GLEVDQVKQAIASTYSREQVLDTYPAFSPLLVEL-------LQEAWLLSSTELEQAELRS 113

Query: 115 GYLVLGILKTPSLRHALLGLSSEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVP 174
           G + L  L T + R+    L S F+ I  E L + F   + DS E A++ +D        
Sbjct: 114 GAIFLAAL-TRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTD-------- 164

Query: 175 GEASGAMAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPI 234
                A  P     +  L RF  ++TEQAR+G+LDP++ R+ E+  +VDIL RRR+NNPI
Sbjct: 165 ---KNAANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPI 221

Query: 235 LTGEAGVGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVI 294
           + GEAGVGK+A++EG ALR+VAG VP  L++VEL SLD+G LQAGAS+KGEFE+RL+ VI
Sbjct: 222 VVGEAGVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVI 281

Query: 295 EDVQASPKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHI 354
           + ++ SPKPIILFIDEAHTL+G+G   G  DAANLLKPALARG L TVAATTW EYKK+ 
Sbjct: 282 DAIKQSPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYF 341

Query: 355 EKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPA 414
           EKDPALTRRFQ+V++ EP+ D+A+ ++RG+ S  EK H V I D+AL+A+ +LS RYI  
Sbjct: 342 EKDPALTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISG 401

Query: 415 RQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQ 474
           RQLPDK++ +LDTACAR+AI++   P  +          + E+ ++ R   +G  + + +
Sbjct: 402 RQLPDKAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSER 461

Query: 475 TNT--ETLLSAERERLETLESRWAEEKALVDELLATRATLREKVGVVDSPAGNNESDEL- 531
            +      L+ E E+    +S W ++K+LV+ ++A RA L E      S A   + D L 
Sbjct: 462 LDVLRNQELADEAEKAALTQS-WQQQKSLVESIIALRAELMEL-----SQAQEQDPDHLL 515

Query: 532 --RAQLVDLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQ 589
             R  L +  Q L A+     L+ P VD   +A V+ADWTG+PV +M  +EL  + +L  
Sbjct: 516 VVRTALQEQYQALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTS 575

Query: 590 HLKKRIIGQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYG 649
            L + I GQ+ A++ I + + T+RA L  P +P G F+L G SGVGKTET + LAE +YG
Sbjct: 576 ILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYG 635

Query: 650 GEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHP 709
           G+Q + TINMSE+QE HTVS L G+PPGY+GYGEGGVLTEA+R+ PYSVVLLDEVEKAHP
Sbjct: 636 GKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHP 695

Query: 710 DVHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELISQVCKDPANVPEPEEIAKA 769
           +V  IF+Q FDKG + DGEGRVID +N +  LT+N G + I     +PA + E      A
Sbjct: 696 EVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDE------A 749

Query: 770 LRQPLLEIFPPALLGRLVTIPYYPLSDEMLKAITRLQLNRIKKRVETTHKVAFDYDDAVV 829
           L   L   F PALL R+  IPY PL  E+L  I R +L R++K  +T +      +++++
Sbjct: 750 LYPELAAFFKPALLARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLI 809

Query: 830 DLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNE 883
           D I+SR T +E+G RM++ I+   LLP +S   L ++ E   +  +R+++   E
Sbjct: 810 DEILSRATRSENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEAGE 863