Pairwise Alignments

Query, 619 a.a., type VI secretion system protein ImpG from Pseudomonas simiae WCS417

Subject, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (566), Expect = 3e-62
 Identities = 179/631 (28%), Positives = 286/631 (45%), Gaps = 68/631 (10%)

Query: 9   YNQELHHVRESAAEFAKEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEY 68
           + +EL  ++E   EF + +P+++    L G    DP VERLLEGFA+LTAR++ K++ E+
Sbjct: 7   FREELAFLKEQGKEFTEIHPQLSR--FLHGRT-TDPDVERLLEGFAFLTARLREKVEDEF 63

Query: 69  PTFTHNLLEIAYPHYLAPTPSMTVVQLQTDPDEGSLASGFPLPRDTVL--RAALGRETQT 126
           P  TH+++ + +P+YL P PSM+VV  + D    S++    +PR+T L  +   G    T
Sbjct: 64  PELTHSIINMLWPNYLRPIPSMSVVAFEPDK---SVSEKQVIPRNTQLDSKPVFG----T 116

Query: 127 CCEYRTAHPVTLWPLQVSNAEYFGNPAAVLGRLAASEPKAKAGLRLTLRTGAELPFNSLD 186
            C + T   V L+P+Q                  A   +    ++++LR   ++      
Sbjct: 117 ACHFNTCRDVALYPMQCQGVH-------------AEHTREATTIQISLRMLGDMTVGDAK 163

Query: 187 LDNLPLYLSGADEQPFRLYEQLLGNACAVFARKPGGDWVERLPQDALRSRGFDDADAAMP 246
           LD +  YL G       LY  L      +     G ++   LP DA  + GF    A +P
Sbjct: 164 LDTVRFYLGGDKYSSQTLYLWLHHYLQKMTIEVQGVEFA--LPADAFSTVGFSSDQALLP 221

Query: 247 VVARAFQGYRLLQEYFALPHRFLFVEFAELSRAVKRCDGQELELIVLFDRHEPSLEGSVG 306
                + GYR+LQEY + P  F F +    ++A+ +    +  L + F +  P+ +  V 
Sbjct: 222 YPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPA-DTRVR 280

Query: 307 AAQFLPFCTPAINLFPKRVDRIHLSDRVNEHHVIADRTRPMDFEIHSLSGITG------- 359
              F  +CTP INLF    D I L+ R +E+ ++     P  +EI S+  + G       
Sbjct: 281 QDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSE 340

Query: 360 --HGTGPEQPFLPFYAVR-DPSRYGRDQAYYTVRREPRVLSSDQRRNGPRSTYVGSETFV 416
                G ++ +  F + + +  R    QA Y   R    +  D           G ++F+
Sbjct: 341 GKRIRGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGD-----------GFDSFI 389

Query: 417 SLVDSRQSPYRHDLRQLGVTALCTNRDLPLFMSIGNGKTDFTLA--DSAPVLSVRCVAGP 474
           S V   ++        + +   CTNR LPL + +G    D  +A   S P  + + +  P
Sbjct: 390 SFVRGDETLSMGVDEAVSIKLTCTNRLLPLELGVG----DICVATDSSPPFATFKNITVP 445

Query: 475 SRPRASHAHDAKAWRLISQLSLNYLSLSEQGQGAAALR--ELLRLYGDSNDAALQLQIEG 532
           S+        +  W LIS LSLNYLSL  +   +  LR  +   L     +   +++++G
Sbjct: 446 SQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLDG 505

Query: 533 LRDVSSKAV---TRRLPMPGPIVFGRGLEITLEFDENAFRGTG-VFLLGAVLERFLARYV 588
           +  + SK V    R LP+       RGL+ TL  D+  F   G +FL G VL  F A Y 
Sbjct: 506 IVKIESKPVDKILRGLPV-------RGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYA 558

Query: 589 SINSFTETVIRTTERGEIMRWKAKPGRRPTL 619
           SINSF E V+      E   W  + G +P +
Sbjct: 559 SINSFHELVVVNISNQEKYSWGTQSGMQPLI 589