Pairwise Alignments

Query, 498 a.a., EvpB family type VI secretion protein from Pseudomonas simiae WCS417

Subject, 492 a.a., type VI secretion system contractile sheath large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  356 bits (914), Expect = e-103
 Identities = 179/433 (41%), Positives = 268/433 (61%), Gaps = 9/433 (2%)

Query: 67  IESIIAAIDAKLTAQVNQIIHHQDFQQLESAWRGLHYLVNNTESDEQLKIRVLNISKPDL 126
           ++ ++  +D K++AQ+++I+H+  FQ +ESAWRGL   V+ T+  E  K+ +L+++K +L
Sbjct: 65  VDQMLVELDKKISAQMDEILHNSQFQAMESAWRGLKLFVDRTDFRENNKVEILHVTKDEL 124

Query: 127 HKTLKKFKGTAWDQSPIFKKMYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGELSKVC 186
            +  +    TA  QS ++K +Y   YGQFGGEP G ++G+Y F  S PD++LL  +  + 
Sbjct: 125 LEDFEFAPETA--QSGLYKHVYSAGYGQFGGEPVGAIIGNYAFTPSTPDMKLLQYMGALG 182

Query: 187 AAMHSPFIAAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPR 246
           A  H+PFI++  P   G+ S++EL N +DL   F +P+Y  WRSLRESED+RY+GLT PR
Sbjct: 183 AMAHAPFISSVGPEFFGIDSFEELPNIKDLKSTFESPKYTKWRSLRESEDARYLGLTAPR 242

Query: 247 FLARLPYGAKTDPVEAFAFEENTDGADSSKYTWANAAYAMAVNINRSFKHYGWCSRIRGI 306
           FL R+PY    +PV++F + EN   A    Y W N A+A A  +  SF  Y WC  I G 
Sbjct: 243 FLLRVPYDPIENPVKSFNYAENV-SASHEHYLWGNTAFAFATRLTDSFAKYRWCPNIIGP 301

Query: 307 ESGGEVENLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIG 366
           +SGG VE+LP H F +  G +  K PTE+ I+DR+E ELA+ GF+ L  +K +D AAF  
Sbjct: 302 QSGGAVEDLPVHVFES-MGALQSKIPTEVLITDRKEFELAEEGFIALTMRKGSDNAAFFS 360

Query: 367 AQSLQKPAEY----DDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIGSFKEKDEMQ 422
           A S+QKP  +    +  +A  N  L  +LPY+    R AHY+K + R++IG++KE+ +++
Sbjct: 361 ANSIQKPKVFPNTKEGKEAETNYKLGTQLPYMMIINRLAHYVKVLQREQIGAWKERQDLE 420

Query: 423 RWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVIVEEVEGNPGYYNSKFYLRPHYQLEGL 482
           R L  WI  YV  D  +     +++ PL AA + V +VEGNPG+Y     +RPH++  G 
Sbjct: 421 RELNSWIKQYV-ADQENPPADVRSRRPLRAARIEVMDVEGNPGWYQVSLSVRPHFKYMGA 479

Query: 483 TVSLRLVSKLPSA 495
              L LV +L  A
Sbjct: 480 NFELSLVGRLDQA 492