Pairwise Alignments

Query, 314 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 380 a.a., DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  177 bits (450), Expect = 3e-49
 Identities = 113/325 (34%), Positives = 163/325 (50%), Gaps = 69/325 (21%)

Query: 4   KDYYKILGVEPTADDKEIKAAYRKLARKYHPDVS-KEKDAEAKFKDASEAYEALKSADKR 62
           +DYY++LGVE  + + ++K AYR+LA K+HPD +  +K +E  FK+A+EAYE L  A KR
Sbjct: 4   RDYYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKR 63

Query: 63  AEYDELRKYGQHG-QPFQGPPGWQSRGGFGGGGGGGGEDFSDFFSSIFGS--RGDAFGGG 119
           A YD+   YG  G  P  G       GG G GGG GG +FSD F  +F     G   GGG
Sbjct: 64  AAYDQ---YGHAGVDPSMG-------GGGGFGGGAGGANFSDIFGDVFSDFFGGGRAGGG 113

Query: 120 QRRPAGRKGQDVEMQLSVFLEETL------------------------------------ 143
             R   ++G D+   L + LEE +                                    
Sbjct: 114 GGRGGAQRGSDLRYTLELNLEEAVRGTNVNIRVPTLVNCKPCDGSGAKKGSSPVTCPTCG 173

Query: 144 ---STESKQISFQV----PQYDASGRHVSNTTKS------------LNVKIPAGVVNGER 184
                  +Q  F V    P+    G+ +S+   S            L+VK+P GV  G+R
Sbjct: 174 GIGQVRMQQGFFSVQQTCPRCHGHGKIISDPCDSCHGEGRVEESKTLSVKVPPGVDTGDR 233

Query: 185 IRLKGQGAPGVGGGANGDLYLIVKFAPHPKFEVDGENLIINLPLAPWELALGAEVAVPTL 244
           IRL G+G  G  GG  GDLY+++    H  F+ DG++L   +P++  + ALG E+ VPTL
Sbjct: 234 IRLSGEGEAGTQGGPTGDLYVVINVREHAIFQRDGKHLFCEVPISFTDAALGGELEVPTL 293

Query: 245 TGKINLKVPAGSQNGQRMRAKGHGL 269
            G++ LK+P G+Q G++ R +G G+
Sbjct: 294 DGRVKLKIPEGTQTGKQFRLRGKGV 318



 Score = 35.0 bits (79), Expect = 3e-06
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 9/96 (9%)

Query: 113 GDAFGGGQRRPAGRKGQDVEMQLSVFLEETLSTESKQISFQVPQYDASGR-----HVSNT 167
           G+   G Q  P G    D+ + ++V        + K +  +VP             V   
Sbjct: 238 GEGEAGTQGGPTG----DLYVVINVREHAIFQRDGKHLFCEVPISFTDAALGGELEVPTL 293

Query: 168 TKSLNVKIPAGVVNGERIRLKGQGAPGVGGGANGDL 203
              + +KIP G   G++ RL+G+G   V GG  GDL
Sbjct: 294 DGRVKLKIPEGTQTGKQFRLRGKGVAPVRGGGAGDL 329