Pairwise Alignments

Query, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 495 a.a., type VI secretion system-associated FHA domain protein TagH from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 105/490 (21%), Positives = 173/490 (35%), Gaps = 67/490 (13%)

Query: 2   SLCLTITSYHKITPGQCSEKSMNQGAMAIGRSSDNDWVLPDPERLVSSQHCVIQYKDGRY 61
           SL L +T+   +  G  ++ +       IG S +  W L D +  V   HC +   DG Y
Sbjct: 8   SLTLLVTNAQHLESGLSAQHTWTSSGGVIGSSPNAQWRLVDAQGSVKPMHCEVMMVDGAY 67

Query: 62  YLTDNSTNGVELVKAGIRMRRGNSELLQDGELIRIGDYEIQARIDFNVQSIDSQPFTGDA 121
            L D S     +  A + +  G    L   + + +G Y ++     N   ++ Q  + DA
Sbjct: 68  CLKD-SCGSTYVNGADMPLGVGQMARLTHKDEVSVGPYRLRVLFG-NAIEVEEQYGSLDA 125

Query: 122 --PNSFEALMGAVVNT--PAPVATPVIAPQFQG-------ASSMDTLPDLFDFLSPTAVP 170
              +  E L+  +     P     P      Q        A S  +L D      P +  
Sbjct: 126 LFASKDEDLLADLTLDIEPEKHELPTNTDPLQALDNLMGAAGSSTSLLDDPKSEQPLSAQ 185

Query: 171 PPTVP-DHVPSEQHDFRPPTPVAMPVAEPPVVSGAVIPEDWDLFGDAPAPVVSAPPLPTP 229
           P  VP D++  +  DF P        +E  + S   + +   + G A A          P
Sbjct: 186 PSLVPQDNLVLQNADFTPQAD-----SEYEMTSSIRLKK---ILGFAKATFAKQTKSEAP 237

Query: 230 QPVTPPPPVV----------------ESMLP-----VADSQQPDLLQA------------ 256
              +  P +                 E +L      VA S QP L ++            
Sbjct: 238 NVTSATPTISQYKTSESNVSEGFTMDEKVLDLLEEEVAKSFQPQLEKSAYSTMHTSSTSQ 297

Query: 257 --------FLRGAGLDQL-RLDKAQAEAQMESIGRSYRLMVEGLIDVLRARASLKGEFRM 307
                    L G G+D     D  +     + +G S +  V GL+D L  + S +  F  
Sbjct: 298 ANHLVTGPILEGLGVDLSDENDMNRMHLLSQELGESLQACVRGLLD-LHQQVS-ESRFGT 355

Query: 308 QQTMIQPAENNPLKFAPNADEALLLLLRHGNQAF-MAPDLAVRDSFNDLRAHQLAVMAGV 366
               +QP E+NPL+   + +E +  L         ++   A+ +S   +R H  A+    
Sbjct: 356 LNRNLQPIEDNPLRLGLSYEETIRTLYDADKSVVHLSAPAAIAESLKTVRDHNEAMQFAT 415

Query: 367 EAAIKHLLSRFEPAQLEERMGKPGGLSSLFNGSRQAQYWQQFTELYSNISREAQEDFQDL 426
             A+  +L+ F P  +  R       S     S  A  W  +   Y  ++   Q  F+ L
Sbjct: 416 SEALSQILNAFSPQVMLRRFHHYKRNSDTTQTSTDAWAWNMYCSYYQELTSNRQRGFEKL 475

Query: 427 FGREFSRAYE 436
           F   F +AY+
Sbjct: 476 FWEIFEQAYD 485