Pairwise Alignments

Query, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

Subject, 443 a.a., type VI secretion protein, VC_A0114 family from Pseudomonas stutzeri RCH2

 Score =  341 bits (875), Expect = 2e-98
 Identities = 183/440 (41%), Positives = 261/440 (59%), Gaps = 2/440 (0%)

Query: 5   NRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLSAGSWGFSELLIDQGLLAQGKLAIVS 64
           ++VVW EGM +  QHFQQ DRY ++ + AR++ L + +WGF  L ID+  L  GKL +  
Sbjct: 4   HKVVWQEGMLLRPQHFQQSDRYYDHQLKARTQKLGSYAWGFFNLEIDRQFLNMGKLVLSQ 63

Query: 65  ARGLLPDGTPFNIPQDDLAPSPLNIDDNLRDGLVYLALPLKRAGARDTVDEGEALEAARY 124
           A G+LPDGT F +  +   P  L+I  N     VYLALPL      +T    +    ARY
Sbjct: 64  ASGILPDGTLFELGSER-EPLALDIPPNTGSTPVYLALPLVTGNHIETRRPEQKDVLARY 122

Query: 125 VSQVREVRDDNAPFENRAPVAVGARALRLLTA-QDGISDYAAIGLVRIKEKRADRALVLD 183
            +   EV D NA   + + V+ G    RLL   Q     Y  + L  + +   D  + LD
Sbjct: 123 TAHELEVADSNAGDSSTSQVSTGLPDFRLLLGEQQSDQAYVKLQLCEVLDTTPDGVISLD 182

Query: 184 DTYIPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQLVNR 243
             +IP  ++  AS  L +   E++ +L  RG+ LA R+ A+G  G +E+ DFM+LQL+NR
Sbjct: 183 PEFIPTYVNFQASGYLLSCLKEVISMLAHRGDTLAERISATGKVGGAEVGDFMMLQLINR 242

Query: 244 AQPLIQHLSQLSPLHPERFFSELVSLAGEFSTFSTSGRRPQEYPQYQHDDLALSFAPVMA 303
            +P+++H   +  +HPE+ + +L+ L GE +TFS+  +RP+   +YQH D   SF  +M 
Sbjct: 243 HEPVLRHYLGVEQVHPEQIYRDLLGLLGELATFSSESKRPRLDGRYQHSDQGASFRKLMD 302

Query: 304 ALREALSMLIDSKATPIPIVEKAYGVHVAMLADKTLLDSASFILVVRADVPGETLRARFG 363
           A+R+ LSM+++  A  + + ++ YG+ V+ L D  LL +ASF+L   A    ETLR R  
Sbjct: 303 AIRQVLSMVLEQHAIELLLQQRQYGIQVSPLHDHKLLGTASFVLAASAQCDSETLRTRLP 362

Query: 364 QQSKVGSVEHIRDLVNLQLPGITLLPLPVAPRQLPYHAGSTYYELDRGSEAWQQLGNSGG 423
              K+G VE IR LVNL LPGI L PLPVAPRQ+P+HAG TY+ L+  +E   QL  SGG
Sbjct: 363 AHLKIGPVERIRQLVNLHLPGIRLKPLPVAPRQIPFHAGKTYFALELSAEDQAQLERSGG 422

Query: 424 FAFHIAGQFPGLNLAFWAIR 443
           FAFH++G F GL L FWA+R
Sbjct: 423 FAFHVSGDFTGLELKFWAVR 442