Pairwise Alignments

Query, 234 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  116 bits (290), Expect = 4e-31
 Identities = 83/204 (40%), Positives = 112/204 (54%), Gaps = 6/204 (2%)

Query: 4   LSAVHKSRGVGSQRYSLVIPA-LALRAGEQLAIVGPSGCGKSTLLDLLALVLAPDQVGQF 62
           L  V KS   G QR++++    L L  GE +A+ GPSG GKSTLL+L+A     D  GQ 
Sbjct: 7   LIQVSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVDS-GQI 65

Query: 63  EFHQQDIAGLWHGDQQSTLAALRSQHLGYVLQTGGLLGFLDVRGNIALSRQLLGLKDDGS 122
             + Q     W   Q S     R  HLG V Q   LL  L+V+ NI  S  L G   +  
Sbjct: 66  VLNHQSTTK-WQDRQWSEF---RRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDSWNPW 121

Query: 123 VARLAEQLEISDQLTKKPTALSVGQRQRVSCARALAHAPQLVLADEPTASLDPLNAERVM 182
              L E+L ++  L ++  ALS GQ+QRV+ ARALAH P L+LADEPT +LD  + ++VM
Sbjct: 122 CDYLVEKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQVM 181

Query: 183 QALLAQAREHRAACVIATHDEPLA 206
             L   A+E + + ++ TH E  A
Sbjct: 182 SLLCELAKESQTSILMVTHSEECA 205