Pairwise Alignments

Query, 422 a.a., heat-shock protein from Pseudomonas simiae WCS417

Subject, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  182 bits (461), Expect = 3e-50
 Identities = 139/487 (28%), Positives = 229/487 (47%), Gaps = 85/487 (17%)

Query: 11  GIDFGTSNSTVGWIRPGEETLIALEDDKITLPSVVFFNFEE--RRPVY------------ 56
           G D+G++N  VG ++  E +L+ L  D   LPS ++    E     VY            
Sbjct: 4   GFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYRALPAELKADYA 63

Query: 57  ---------GRLALHE-------------------YLEN-YEGRLMRSLKSLLGSKLIKH 87
                     R+  HE                   YLE   EG  +RS KS LG+  ++ 
Sbjct: 64  KKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRP 123

Query: 88  DTSVLGTAMPFTDLLALFIGQLKSRAEANAGRE---------FEEVVLGRPVFFVD-DDP 137
           +   L     F D++ L +  +K RAEA   ++             V+GRPV F      
Sbjct: 124 EQVAL-----FEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGE 178

Query: 138 MADQEAENTLVDVARKIGFKDISFQYEPIAAAFDYESTIQKEELVLIVDIGGGTSDFSLV 197
            ++++AE  L   A++ GF D++F +EP+AA  DYE+ ++ ++ VL+VD+GGGT+D S+V
Sbjct: 179 ESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSVV 238

Query: 198 RLSPDRRHNDNRQSDILATGGVHIGGTDFDKQLSLNGMMPLFGYGSRMKSGAYMPTSHHM 257
           ++ P  + + +R  D L   G  IGG D D  L++N  MP FG GS M +G  MP++   
Sbjct: 239 KMGPSHKASFDRSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFW 298

Query: 258 NLATWHTINSVYSQKSQLALGSMRY------DIEDTGGIDRLFKLIEQRAGHWLAMEVEE 311
           N      +N + +Q+    L + +       + E    + RL K+ +Q+  + +    E 
Sbjct: 299 NAV---AVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAER 355

Query: 312 TKIQLTHEDSRHVLLDRVEPGLSVELSRALFESAIDGLLERVRNSVTQLLNDASVSV--- 368
            KI L+   +    L+ +E  LS E++R  FE+AI+  L ++   + Q L  A+ S+   
Sbjct: 356 AKIALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGN 415

Query: 369 ---------------AQVDTVFFTGGSSGIPALRHSISAMLPNARHVEGNIFGSIGSGLA 413
                           Q D ++ TGG++  PA+   I+++ P+   V G+ FGS+ +GL 
Sbjct: 416 GLAPEELSVEAGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLT 475

Query: 414 IEASKRY 420
             A K +
Sbjct: 476 RWAQKHF 482