Pairwise Alignments

Query, 422 a.a., heat-shock protein from Pseudomonas simiae WCS417

Subject, 638 a.a., chaperone protein dnaK (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 91.3 bits (225), Expect = 8e-23
 Identities = 106/405 (26%), Positives = 166/405 (40%), Gaps = 94/405 (23%)

Query: 11  GIDFGTSNSTVGWIRPGEETLIALEDDKITLPSVVFFNFEERRPVYGRLALHEYLENYEG 70
           GID GT+NS V      E  +IA  + K T PSVV F     R V G  A  + + N   
Sbjct: 6   GIDLGTTNSCVAVFEGNEPVVIANSEGKRTTPSVVAFVDGGERKV-GDPAKRQAITN-PT 63

Query: 71  RLMRSLKSLLGS--------------KLIKHDTS-----VLGTAMPFTDLLALFIGQLKS 111
           R + S+K  +G               K++K D +     + G      ++ A+ + ++K 
Sbjct: 64  RTIFSIKRFMGENWDQVQKEVTRVPYKVVKGDNNTPRVDIDGRLYTPQEISAMILQKMKK 123

Query: 112 RAEANAGREFEEVVLGRPVFFVDDDPMADQEAENTL-VDVARKIGFKDISFQYEPIAAAF 170
            AE   G+E  E V+  P +F D    A +EA     ++V R +         EP AAA 
Sbjct: 124 TAEDYLGQEVTEAVITVPAYFSDSQRQATKEAGQIAGLEVKRIVN--------EPTAAAL 175

Query: 171 DYE-STIQKEELVLIVDIGGGTSDFSLVRLSPDRRHNDNRQSDILATGG-VHIGGTDFDK 228
            Y      K+  + + D+GGGT D S++              ++L+T G  H+GG DFD 
Sbjct: 176 AYGLDKAHKDMKIAVFDLGGGTFDISILEFG-------GGVFEVLSTNGDTHLGGDDFD- 227

Query: 229 QLSLNGMMPLFGYGSRMKSGAYMPTSHHMNLATWHTINSVYSQKSQLALGSMRYDIEDTG 288
           Q+ +N ++  F    +   GA +                                 +D  
Sbjct: 228 QVIINWLVQEF----KNDEGADL--------------------------------TQDPM 251

Query: 289 GIDRLFKLIEQRAGHWLAMEVEETKIQLTHEDSRHVLLDRVEP------GLSVELSRALF 342
            + RL +              E+ KI+L+   S  + L  + P       L   L+RA F
Sbjct: 252 ALQRLKE------------AAEKAKIELSSSTSTEINLPYIMPVNGVPKHLVKTLTRAKF 299

Query: 343 ESAIDGLLERVRNSVTQLLNDASVSVAQVDTVFFTGGSSGIPALR 387
           ES   GL++       + ++DA +S + +D V   GGSS IPA++
Sbjct: 300 ESLAHGLIQACLEPCKKAMSDAGLSNSDIDEVILVGGSSRIPAVQ 344