Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 274 a.a., putative signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 9/222 (4%)

Query: 193 EIPPLADTAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSWAASPYYASPGKIRSVED 252
           ++P L     +++++  D NAT+ +I   V  DP ++A+V+  A   +Y    ++ S+++
Sbjct: 12  DLPRLPKAISELLEVVNDDNATVKNIATKVSHDPLISAKVLRLANCAHYGHSREVGSIDE 71

Query: 253 AIVRVLGFDLVINLALGLALGKTLSLPKDHPHQSTPYWHQSIYTAAVIEGLTRAMPRAQR 312
           A+VR LG   +  L L  A+    S+PK        +W Q+   A   + + +      +
Sbjct: 72  AVVR-LGMQTLRTLVLASAV--MGSVPKCQGVDLAQFWGQTFEIALYCQEMAKRC--GVQ 126

Query: 313 PEAGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLCHSYVEQHLLGISREQIGA 372
           P+   T   G+LH  G LL+A + P     I   +       H++ E+ LLG     IGA
Sbjct: 127 PDEAFT--CGILHRIGDLLIAAISPEDAEKITEAVAQGKDK-HAF-ERELLGYDSPDIGA 182

Query: 373 WLMRYWDMPDELSTALRFQHDPTYDGQYAEYPNLVCLAVRLL 414
            L + W     L   + +Q  P     +++   L+CLA ++L
Sbjct: 183 LLAKNWKFTPALVQGILYQDHPKDSNPFSKLAALLCLAYKVL 224