Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 715 a.a., (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI) from Rhodospirillum rubrum S1H

 Score =  505 bits (1300), Expect = e-147
 Identities = 275/713 (38%), Positives = 414/713 (58%), Gaps = 26/713 (3%)

Query: 7   LADRLSAYLGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSL 66
           L +R+ AY      +L+ RAY YA + H  Q R SG+ Y +HP+ VA IL    +D  S+
Sbjct: 9   LVERVKAYDPNANEDLLNRAYVYAMKMHGSQLRASGDPYFSHPIDVAGILTRYKLDCASI 68

Query: 67  MAAMLHDVIEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAMAM 126
           + A+LHD IEDT    E +   FG  VA LVDGV+KLT++   +    QAENF+K+ +AM
Sbjct: 69  ITALLHDTIEDTEATLEDVRQLFGNDVARLVDGVTKLTRIQISSDHAKQAENFRKLLLAM 128

Query: 127 ARDIRVILVKLADRLHNMRTLEVL-SGEKRRRIAKETLEIYAPIANRLGMHAIRIEFEDL 185
           + DIRV++VKLADRLHNMRTL  +   EKR RIA ET+EIYAP+A R+GM  I+ E EDL
Sbjct: 129 SEDIRVLMVKLADRLHNMRTLHFIRKPEKRARIALETMEIYAPLAERIGMAEIKEELEDL 188

Query: 186 GFKAMHPMRSARIYQAVKRARGNRKEIVNKIEESLSHCLAIDEIEGEVSGRQKHIYGIYK 245
            F+ ++P     I   +   R     +V K+ + L   LA   +  E++GR+K  Y I++
Sbjct: 189 AFRELYPDAKEGIEARLTFLREQGGTLVPKVIDQLKAALAEHGLTAEITGREKTPYSIWQ 248

Query: 246 KMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQS 305
           KM+ K  +F ++ D+ AFRI V+ ++ CY+ LG +H  Y  +P RFKDYI+ PK NGYQS
Sbjct: 249 KMKRKNISFEQLSDIMAFRITVENLEQCYQALGIIHASYPMIPDRFKDYISTPKRNGYQS 308

Query: 306 LHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHARARQWVKGVLE 365
           +HT + G   + IEIQIRT EM  +A  G+AAHW YK            R  +W++ +LE
Sbjct: 309 IHTAVIGPERLRIEIQIRTAEMHSVAELGVAAHWSYKQGSPVM----DGRQYRWIRELLE 364

Query: 366 MQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCIAC 425
           + +   +  EF+E  K+++F D+V+ FTPKG ++ LP G+T VDFAYAVHT VG+ C++ 
Sbjct: 365 ILEHTSSPEEFLEHTKLEMFSDQVFCFTPKGDLIGLPSGATPVDFAYAVHTQVGDRCVSA 424

Query: 426 RINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVTGKARTHIRHALKLQRRSESIS 485
           ++N RL PL  PL +G  VEI ++    P+P W  FVVTGKAR  IR  ++ QRR + + 
Sbjct: 425 KVNGRLVPLRTPLHNGDQVEIATSKAQTPSPEWERFVVTGKARAQIRKFVRSQRRDQYLI 484

Query: 486 LGERLLNKVLNGFDSALDKIPTERVQAMLHEYRQETIEDLLEDIGLGNRMAYVVARRLLG 545
           LG +LL +    F +   ++  + +  +L ++R +++EDL+ D+G G   A  V + +  
Sbjct: 485 LGRQLLER---AFKAENYEMTEKGLDGVLKKFRADSVEDLIVDVGEGQLPAREVVQAVYP 541

Query: 546 EGEQLP----------------SPEGPLAIRG-TEGLVLSYAKCCTPIPGDPIVGHLSAG 588
             + +P                S +    I+G   G+ L +AKCC  +PGD IVG ++ G
Sbjct: 542 GLKMVPKLAAVVTLGRTKKPRASDDHSFKIKGMIPGMALHFAKCCHSLPGDRIVGIVTTG 601

Query: 589 KGMVVHLDNCRNITEIRHNPEKCIQLSWAKDVTGEFNV-ELRVELEHQRGLIALLASSVN 647
           KG+ +H  +C  + +    PE+ + L+W  +   + +V  + V + ++ G +  L + + 
Sbjct: 602 KGITIHTIDCDQLEQFSDEPERWLDLAWDAEADSQVHVGRVNVVVANEPGSLGALTTVIA 661

Query: 648 AADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITRMR 700
              GNI  + +  R      + + V V D  HL  +I  LRA + +  + R R
Sbjct: 662 KNLGNITNLKITNRQQDFFDMIVDVEVKDVRHLTNIIAALRATSAINYVERAR 714