Pairwise Alignments

Query, 701 a.a., (p)ppGpp synthetase from Pseudomonas simiae WCS417

Subject, 740 a.a., (p)ppGpp synthetase, RelA/SpoT family from Dechlorosoma suillum PS

 Score =  361 bits (926), Expect = e-104
 Identities = 225/719 (31%), Positives = 368/719 (51%), Gaps = 39/719 (5%)

Query: 15  LGPDQVNLVRRAYFYAEQAHDGQRRRSGEAYVTHPLAVANILADMHMDHQSLMAAMLHDV 74
           L  ++   +R A  +A  A+      SGE  ++H L +A I+A + +D  S  AA+L  V
Sbjct: 25  LSENETAFIREAALFARDAYGDNTLGSGEGILSHALGMALIIAGLKLDADSRAAALLFAV 84

Query: 75  IEDTGIAKEALSAQFGETVAELVDGVSKLTQMNFETKA------------EAQAENFQKM 122
                   E L+ +FG  VA LV G+S+L ++   ++             +AQ E  +KM
Sbjct: 85  ATYDEKGLETLNERFGGGVAHLVGGISRLNRLRPISRGFVADTTQNPQEMKAQVEVLRKM 144

Query: 123 AMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHAIRIEF 182
            +AM  DIRV+L++LA R   +R       + R  +A+ETLE+Y+P+ANRLG+  ++ E 
Sbjct: 145 FLAMVEDIRVVLLRLASRTQTLRYYAAEPDDLRVHVARETLELYSPLANRLGVWELKWEL 204

Query: 183 EDLGFKAMHPMRSARIYQAVKRARGNRKE-IVNKIEESLSHCLAIDEIEGEVSGRQKHIY 241
           EDL F+ +HP    +I + +   R  R++ I++ ++   S   A+   + E+ GR KHIY
Sbjct: 205 EDLSFRFIHPDTYKKIAKMLDEKRLEREQFIIDAVDRVKSELAAVGIHKAEIYGRPKHIY 264

Query: 242 GIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKAN 301
            I+ KMR K   F+E+ D+ A R+IVD+V  CY VLG VHN++ P+P  F DYI+ PK N
Sbjct: 265 SIWNKMRKKGVDFSEVYDIRALRVIVDEVKDCYTVLGIVHNIWTPIPKEFDDYISNPKGN 324

Query: 302 GYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSSGDEQPKGTHARARQWVK 361
            Y+SLHT +    G  +E+QIRT EM   A  G+AAHW YK       +  +     W++
Sbjct: 325 NYRSLHTAVRCPDGRSLEVQIRTWEMHRHAELGVAAHWRYKEGTKHSSEDNYDDKIAWLR 384

Query: 362 GVLEMQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNS 421
            +L  +    +S +++   K     + +YV TP+G++++LP+G+T VDFAY +HTD+G+ 
Sbjct: 385 QLLTWKDEVSDSSDWVNHYKQAALDETIYVMTPQGKVVDLPQGATPVDFAYRLHTDLGHR 444

Query: 422 CIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN----FVVTGKARTHIRHALKL 477
           C   +++  L PL   L++G  VEIV+A    P+  WLN    ++ T  ART  R     
Sbjct: 445 CRGAKVDGALVPLDTALKTGQRVEIVAAKQGGPSRDWLNPSLGYIATKTARTKARAWFSN 504

Query: 478 QRRSESISLGERLLNKVLN----------------GFDSALD-KIPTERVQAMLHEYRQE 520
               ES++ G  ++ K +                 G+  A D  I   R +  L  + Q 
Sbjct: 505 LALEESLAEGRGIVAKEIQRVGGGGTNLEELAGKLGYAKADDLYIAAARNELNLRLF-QA 563

Query: 521 TIEDLLEDIGLGNRMAYVVARRLLGEGEQLPSPEGPLAIRGTEGLVLSYAKCCTPIPGDP 580
            +      +         V R    EGE   + +  + I G + L+   A+CC P P DP
Sbjct: 564 AVRGTEPPVDERGMEPMPVRRPKPAEGE--GAGDRGILIVGVDKLLTQLARCCKPAPPDP 621

Query: 581 IVGHLSAGKGMVVHLDNCRNITEIRH-NPEKCIQLSWAKDVTGEFNVELRVELEHQRGLI 639
           I G ++ GKG+ +H  +C +   ++  +PE+ I+  W     G F V++ V+   ++GL+
Sbjct: 622 IQGFVTRGKGVSIHRADCPDFANLQALHPERVIETEWGGHPHGIFPVDITVDAHDRQGLL 681

Query: 640 ALLASSVNAADGNIEKISMDERDGRISVVQLVVSVHDRVHLARVIKKLRALTGVIRITR 698
             ++        N+  +    + G+ + +   V + +   L R +K +  + GV+   R
Sbjct: 682 RDISDVFAREKINVIGVQTLSKQGQ-AHMGFTVEILNLPQLTRTLKLIHDVQGVVGARR 739