Pairwise Alignments

Query, 259 a.a., exodeoxyribonuclease III from Pseudomonas simiae WCS417

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score =  154 bits (390), Expect = 1e-42
 Identities = 80/254 (31%), Positives = 143/254 (56%), Gaps = 5/254 (1%)

Query: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60
           M+++S NVNGI+A ++ G +++L+ ++ D++C+Q+T+  + ++      LDGYF Y   A
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQ---LGLDGYFQYWNYA 57

Query: 61  EVPTQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN 120
           E     G A++++++P  VI G+     +  GR +  +FD+  +  +  P+ Q G   L 
Sbjct: 58  ERKGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFDEYYLVNVYTPNSQRGLTRLE 117

Query: 121 QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE 180
            + K  +DF  Y+ K    ++  ++CG L VA +++D+KN + + ++ GF   ER   D 
Sbjct: 118 YRQKWDEDFLSYI-KTLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGFDN 176

Query: 181 IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ 240
           IV N G++D  RE + E D YSWW     A   N+GWR DY  ++  LR  ++ A +  +
Sbjct: 177 IV-NSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDAYIMPE 235

Query: 241 PRFSQHAPLIVDYD 254
              S H P+ + ++
Sbjct: 236 VMGSDHCPVGIIFE 249