Pairwise Alignments

Query, 474 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 488 a.a., regulatory protein GntR (NCBI) from Rhodospirillum rubrum S1H

 Score =  160 bits (406), Expect = 7e-44
 Identities = 127/404 (31%), Positives = 194/404 (48%), Gaps = 23/404 (5%)

Query: 1   MTLYMNLAELLGTRIEQGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRLLEDNGLAMPKP 60
           M L   L  LL  RI  G    G RLPS RAL+ E GVS +TV  AY  L   G  + +P
Sbjct: 10  MPLQAALIALLRRRIFSGALGAGARLPSTRALAAELGVSRNTVLAAYDSLRAEGYLIARP 69

Query: 61  KSGYFVPVSRELPALPEVGR-----PAQ--RPVEISQWDQVLE------LIRAVPRKDVI 107
            SG+   V+ +LP   ++G      PA     V +SQW + +        + A PR D +
Sbjct: 70  GSGH--RVAGDLPEPADLGAGLGGAPAGVGTAVALSQWGRRVTPEDPQPAVAASPRYDFL 127

Query: 108 QMGRGMPDVLSPTIKPLLRSLARVS--RRQDLPGLYYDNILGCVELREQIAR-LSLDSGC 164
               G  +      K   R++  V   RR++   L+Y + +G   LR  +A  L L  G 
Sbjct: 128 Y---GTSNTTLFPHKDWRRAILGVLDLRRREPGQLFYQDAMGSPALRRAVADWLRLHRGI 184

Query: 165 QLTAEDIVITTGCHEALSASIHAICEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPI 224
                 +VIT G  + +  +   + +PG +VAV+ P + G  + L  LG + L IP D  
Sbjct: 185 DTGTRGVVITNGSQQGIDLATRLLVDPGAVVAVEEPGYQGFREILSALGARLLPIPVDD- 243

Query: 225 TGISLEALELALEQWPIKVIQLTPNCNNPLGYIMPEARKKALLTLAQRFDVAIIEDDVYG 284
            G+ ++ LE       +  + +TP+   P G ++  AR+ ALL  A+     +IEDD   
Sbjct: 244 QGLRVDHLEAVSRDAAVAGVCVTPSHQFPTGAVLSPARRMALLAWAKAEGAWVIEDDYDS 303

Query: 285 ELAYSYPRPRTIKSFDEDGRVLLCSSFSKTLAPGLRIGWVA-PGRYLERVLHMKYISTGC 343
           E  Y       + + D+DGRV+  +SFSK L P LR+G  + P   L      + +S   
Sbjct: 304 EFRYGARPLAALAAGDDDGRVIHLASFSKALFPALRLGMASVPAGLLGPFGAARRLSDRH 363

Query: 344 TATQPQIAIAEFLKGGHFEPHLRRMRTQYQRNRDLMIDWVSRYF 387
                Q A+A +++ G F  HLRR+RT+    R +++D ++R+F
Sbjct: 364 GPALEQDALARWMEDGTFARHLRRVRTRQAERRAVLVDALTRHF 407