Pairwise Alignments

Query, 289 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 70/286 (24%), Positives = 130/286 (45%), Gaps = 22/286 (7%)

Query: 8   LAIFIWAGNTVVNKLAVGALFPAEIGFYRWLLAALLFTPFMIKPVIANWALI-RPNLGKV 66
           L +  W  + V  K+ +  + P  IGF R ++AA++   F     I N+    + +   +
Sbjct: 13  LTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFF-----IRNFTKYSKEDFVYI 67

Query: 67  FILGVLGMAVYQSLAYYAASLTTATNMGIILSLMPLMALTAAII---SLGQRLTYGALTG 123
            + G LG+  Y      A   TTATN  +I + +P+  L  + I    +  ++ Y    G
Sbjct: 68  VLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKIKY---FG 124

Query: 124 AVLSFAGVVVVVSAGSLDALLQHGVNLGDGMMLVATLAYAVYSTLLKKWQLRLPPLVLLY 183
           +++   GV +++  G     L     LGD +M  A   + +Y+ +++K Q      V   
Sbjct: 125 SLIGLFGVFILILNGKFVLELNP---LGDILMFGAVCTWVLYTFVIQKLQKHDDLKVTRD 181

Query: 184 LQVLVAVVVLFPLFLFSAKAGLGWANIPL-------VLYACLLASMLAPLAWMHSVKTLG 236
           + ++ AV  +    +     G+    I L       +LY  +  S +A L W  +++  G
Sbjct: 182 ITLIGAVFFIPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCSAIAYLFWNMAIRLAG 241

Query: 237 PSRTTLFFNLLPLITALIAAVVLKEELALYHLVGGLLTLGGVILSE 282
            S TT    ++P++  +  A++LK    +Y ++G +L L GV +SE
Sbjct: 242 ASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYISE 287