Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 444 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

 Score =  225 bits (574), Expect = 2e-63
 Identities = 144/444 (32%), Positives = 223/444 (50%), Gaps = 11/444 (2%)

Query: 14  ILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVGT 73
           +L L+ P++ +QLA   M   D +M  R+ P  LA   LG + +  V +   G + A   
Sbjct: 1   LLALALPIMVAQLATTAMGFVDAVMAGRVGPRDLAAVALGNSIWVPVFLLMTGTLLATTP 60

Query: 74  LVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLLLFGQTETNVHSAGQFL 133
            VA R GAG       L +  LWLA ++ L A L L++ +P+L +       +    ++L
Sbjct: 61  KVAQRFGAGTFAEIGPLVRQALWLALVVGLIASLALFSAEPILHIMNVDPELIGPCMEYL 120

Query: 134 TILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFGLPKLGLM 193
             +   LP    +  LR F+  +G+ +P MV+ L G   N  LN+  I G  G+P +G +
Sbjct: 121 RGIGTGLPAVALYHVLRCFSDGLGRTRPAMVLGLCGLALNIPLNYIFIYGHLGVPAMGGV 180

Query: 194 GIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLPIGGTYAV 253
           G G  TA+V   MAL +  +      Y +  L +         ++ L  +GLPIG     
Sbjct: 181 GCGWATAIVMWVMALGMAGWARWAPAYQSSRLFSRFDWPQWAVIKRLLGIGLPIGIAVFA 240

Query: 254 EVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQHYGAGQLLQA 313
           E  +FA  AL +G++G+T +A HQIAL   S+ FM+P  +  AVT+R+GQ  G  Q  +A
Sbjct: 241 ESSIFAVIALLIGSLGATVVAGHQIALNFSSLVFMIPYSLGMAVTVRVGQALGRAQPREA 300

Query: 314 RLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSLLAVAAWFEL 373
           R A  VG+G   A     A++++    P+  +     DP    VI +A  L+  AA F+ 
Sbjct: 301 RFAAGVGMGTALAYACLSASLMFALRGPIAAIYT--ADPV---VIEVASMLIVYAALFQF 355

Query: 374 FDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGW-----GPTGVWWGL 428
            D +Q  A G +RG +D + T ++    YW IG P  + +  T  W     GP+G+W GL
Sbjct: 356 SDAIQVTAAGALRGYQDTRVTMILTLFAYWGIGLPVGYALGLT-DWLGAASGPSGLWQGL 414

Query: 429 ALGLACAAVSLTWAFEAKMKRMIR 452
            +GL+CAA+ L+       ++ IR
Sbjct: 415 IVGLSCAALMLSIRLARSARKQIR 438