Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 87.8 bits (216), Expect = 7e-22
 Identities = 99/430 (23%), Positives = 184/430 (42%), Gaps = 38/430 (8%)

Query: 16  RLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSF-----VSIFCIGVIAA 70
           +++ P+I   +A ++  L DT  ++ L  +ALA     A SY+F     V+   +G+   
Sbjct: 30  QMTVPMIFGLVAILMFNLVDTFFISLLGTQALA-----AISYTFPVTFAVNCITMGIGVG 84

Query: 71  VGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLL-LWNLKPLLLLFGQTETNVHSA 129
           + T +    G GD   A R++  GL LA L+  AA  L L  ++PL LL G +   +   
Sbjct: 85  LSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLI 144

Query: 130 GQFLTILPFALPGFLSFMALRGFTSAIGKAQ-PVMVISLGGAVANYLLNHALIEGMFGLP 188
            +++ +    +P  +  MA      A G  + P  ++ L G + N  L+  LI G    P
Sbjct: 145 KEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAGLI-NGALDPLLIFGYGPFP 203

Query: 189 KLGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLPIG 248
           +LG+ G  + +A    G  +  ++ + +     A P        +  +LR+ W+  L IG
Sbjct: 204 ELGIQGAAIASAFSWLGALIGSLYLLIKREKLLAIP--------SLPHLRDDWQQILKIG 255

Query: 249 GTYAVEVGL----FAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQH 304
              A+   +     A   + + + G+  +AA+    +I S+  +V   ++ A+T  + Q+
Sbjct: 256 TPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQN 315

Query: 305 YGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDH---NDPAFHDVIVLA 361
            GA    ++     + + F     L    ++   S PL  L        D  +H ++V+ 
Sbjct: 316 LGAQNPARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVP 375

Query: 362 VSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGP 421
           VS          F GV  + +  +  L      F       ++   P+AW+      +  
Sbjct: 376 VSY--------GFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWIGGRL--YNI 425

Query: 422 TGVWWGLALG 431
            G++ G+A+G
Sbjct: 426 EGLFIGIAVG 435