Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 468 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  261 bits (667), Expect = 4e-74
 Identities = 169/439 (38%), Positives = 237/439 (53%), Gaps = 10/439 (2%)

Query: 8   RTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGV 67
           RTEL A L L+ PLI + LA   +  TD L++  L   +LA   + A  +  + +F +G+
Sbjct: 17  RTELGATLSLAWPLILTNLAQAALTTTDLLLIGSLGSRSLAAAAMAAGLFQALMLFGLGL 76

Query: 68  IAAVGTLVAI-----RHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLLLFGQT 122
           ++A   L+A      RH   D+    R  + GLW A L++L   L+LW+ + +L+ FGQ 
Sbjct: 77  VSATLPLLATALGRNRHSVRDVR---RTVRQGLWSAGLISLPLWLILWHTEAVLIAFGQE 133

Query: 123 ETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQ-PVMVISLGGAVANYLLNHALI 181
                 A  F+  L + L  FL ++ LR F SA+ +   P++V  L     N L   ALI
Sbjct: 134 PALAAEAAGFMHTLQWGLLPFLGYIVLRAFLSALERPMWPLLVAGLAIGF-NALAAWALI 192

Query: 182 EGMFGLPKLGLMGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELW 241
            G  GLP LGL G G+ +++ +  M   L   I R R    Y L     R +   L  LW
Sbjct: 193 FGHLGLPALGLPGAGVSSSLSSLFMVAGLALVITRQRRLKRYRLFGRFWRPDWPRLVTLW 252

Query: 242 RLGLPIGGTYAVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRI 301
           RLGLP+  ++A EV +F  + + MG +G+  LAAH IALQI ++ FMVP G+  A T+R+
Sbjct: 253 RLGLPMAISFAFEVSIFQASMMMMGILGADALAAHTIALQIATLTFMVPLGLGQAATVRV 312

Query: 302 GQHYGAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLA 361
           G+  GAG +   R AG V  G G A M G A ++      LIG  +D +      VI LA
Sbjct: 313 GRALGAGTIPALRRAGWVAYGAGVAFMGGAALMMLSVPRLLIGAFLDADLAENAPVIDLA 372

Query: 362 VSLLAVAAWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGP 421
           V L+A+AA F++ DG Q +  G +RGL D K   L+ A  YW +G P   L+AF LG G 
Sbjct: 373 VVLMALAALFQIADGAQAVCNGMLRGLHDTKVPMLLAALGYWGLGLPLGALLAFPLGVGA 432

Query: 422 TGVWWGLALGLACAAVSLT 440
            GVW GLA GL+  AV +T
Sbjct: 433 PGVWIGLAGGLSVVAVLMT 451