Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 464 a.a., multidrug resistance protein NorM from Phaeobacter inhibens DSM 17395

 Score =  246 bits (627), Expect = 2e-69
 Identities = 156/443 (35%), Positives = 235/443 (53%), Gaps = 10/443 (2%)

Query: 13  AILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVG 72
           AI  L  PLI   +A   + LTDT+M+     EALA   LG+  +  + +   G   AV 
Sbjct: 19  AIAVLGLPLIGGHVAQFAIGLTDTVMLGWYGVEALAAVTLGSTYFFTIFLLGSGFAFAVM 78

Query: 73  TLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLLLLFGQTETNVHSAGQF 132
            +VA   GAG+     R T+  LWL+    L    LLW  +P+LLL GQ     H A ++
Sbjct: 79  PMVAAAAGAGEERQIRRSTRMALWLSLAYGLLVMPLLWWSEPILLLLGQEAEVAHGAAEY 138

Query: 133 LTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFGLPKLGL 192
           L I  +AL   L +M L+ + +A+ + Q V+++S+  A  N L+N+ALI G +G P+LG+
Sbjct: 139 LRIAGWALFPALLYMVLKSYLAALERTQIVLLVSVLAAALNALINYALIFGNWGAPELGV 198

Query: 193 MGIGLVTAVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLPIGGTYA 252
            G  L  A +A  +   +    +  +    + L     R + + L  + RLGLPIG T  
Sbjct: 199 TGAAL--ASLATNVFACIFVLFYALKALPEHELLKNFQRPDWEMLSRVLRLGLPIGLTNL 256

Query: 253 VEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQHYGAG---- 308
            E  LFA +A+ MG +G+  L AH IAL +  +AFM+  G+S A T+R G  +G G    
Sbjct: 257 SETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMMHLGLSNAATIRAGNAFGRGDRDH 316

Query: 309 QLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSLLAVA 368
               AR+   + +G     M+ F AV     + LI L +  +DP   +++++   LLA A
Sbjct: 317 MARGARVVMAMSLGLSVLGMILFLAV----PEALISLFLSPDDPDRAEIVLIGSVLLAAA 372

Query: 369 AWFELFDGVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGPTGVWWGL 428
           A F+L DG+Q IA+G +RG++D     +I A  YW +G P+++L+ FT   G  GVW GL
Sbjct: 373 ALFQLMDGMQVIALGLLRGVQDTGVPMVIAALSYWAVGIPASYLLGFTFEMGGLGVWLGL 432

Query: 429 ALGLACAAVSLTWAFEAKMKRMI 451
            LGL  A V L   F  +  +++
Sbjct: 433 VLGLTAAGVFLMIRFWRRSIKLV 455



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 21/223 (9%)

Query: 4   QHPARTELWAILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIF 63
           Q P    L  +LRL  P+  + L+   +     +MM  L   AL   G+  +      + 
Sbjct: 234 QRPDWEMLSRVLRLGLPIGLTNLSETSLFAASAMMMGWLGTVALGAHGIALSLGGLAFMM 293

Query: 64  CIGVIAAVGTLVAIRHGAGDIEGATRLTQAGLWLAWLMALAA-GLLLWNLKP--LLLLF- 119
            +G+  A         G GD +   R   A + +A  + L+  G++L+   P  L+ LF 
Sbjct: 294 HLGLSNAATIRAGNAFGRGDRDHMAR--GARVVMAMSLGLSVLGMILFLAVPEALISLFL 351

Query: 120 -----GQTETNVHSAGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLG----GA 170
                 + E  +  +        F L   +  +AL           P+++ +L     G 
Sbjct: 352 SPDDPDRAEIVLIGSVLLAAAALFQLMDGMQVIALGLLRGVQDTGVPMVIAALSYWAVGI 411

Query: 171 VANYLLNHALIEGMFGLPKLGLMGIGLVTAVVANGMALALMWY 213
            A+YLL      G  G      + +GLV  + A G+ L + ++
Sbjct: 412 PASYLLGFTFEMGGLG------VWLGLVLGLTAAGVFLMIRFW 448