Pairwise Alignments

Query, 467 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 460 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 91/427 (21%), Positives = 180/427 (42%), Gaps = 22/427 (5%)

Query: 13  AILRLSGPLIASQLAHMLMVLTDTLMMARLSPEALAGGGLGAASYSFVSIFCIGVIAAVG 72
           AI+++S P++ +     L  + D + +A L  +ALA  GL       +     GV     
Sbjct: 17  AIVKISLPMVIAMSFQSLYNIIDAIWVAGLGSDALAAIGLFFPFMFALIAISNGVGIGGS 76

Query: 73  TLVAIRHGAGDIEGATRLTQAGLWLAWLMALAAGLLLWNLKPLL----LLFGQTETNVHS 128
           + ++ R G  + + A  +    +    ++ +  G+LL  + P L     L G +   V  
Sbjct: 77  SAISRRIGQKNKDAADNIAVHSI----VLGIILGILLTGVIPFLGTIFSLIGASGNTVTM 132

Query: 129 AGQFLTILPFALPGFLSFMALRGFTSAIGKAQPVMVISLGGAVANYLLNHALIEGMFGLP 188
           A ++ TIL       L            G  +  M   + G+V N +L+   I  +    
Sbjct: 133 AVEYSTILFGGAVALLFTNIANAILRGEGDTKRAMYAIILGSVLNIVLDPIFIYVL---- 188

Query: 189 KLGLMGIGLVT--AVVANGMALALMWYIHRNRTYAAYPLSTGLLRLNTQYLRELWRLGLP 246
            +G+ G    T  ++V  G+ L + W   +  T+    +S    +L+   ++E++ +GLP
Sbjct: 189 NMGVAGAAWATLLSLVITGI-LFVYWLFIKKDTFLK--ISFEKFKLDINIIKEIFSIGLP 245

Query: 247 IGGTY-AVEVGLFAFAALCMGTMGSTQLAAHQIALQIVSVAFMVPAGMSYAVTMRIGQHY 305
              ++  +   +F   A+     G+  +A      +IVS+  +   G++  VT+  G  Y
Sbjct: 246 ASISHLTMAFSMFLLTAIVAKAGGNDGIAVFSTGWRIVSMGTIPLVGLATGVTVVTGAAY 305

Query: 306 GAGQLLQARLAGRVGIGFGAAVMLGFAAVLWLYSDPLIGLLIDHNDPAFHDVIVLAVSLL 365
           G+    +  ++ +  +  G  V    AA++ ++ +  I  L  +++ + H +  L V L 
Sbjct: 306 GSANPEKLEISYKYALKMGILVETIIAALILIFENQ-ITYLFTYSENSVHILEGLLVFLK 364

Query: 366 AVAAWFELFD-GVQTIAMGCIRGLKDAKTTFLIGAGCYWLIGAPSAWLMAFTLGWGPTGV 424
            +  ++     G+ T AM   +G+     +  I      ++  P A+        G TGV
Sbjct: 365 YMFLFYPTLPLGMLTAAM--FQGVSKGNNSLFISLLRTIILQIPMAYTFGIIFNQGLTGV 422

Query: 425 WWGLALG 431
           W+G+ LG
Sbjct: 423 WFGMILG 429