Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (384), Expect = 9e-42
 Identities = 98/276 (35%), Positives = 159/276 (57%), Gaps = 10/276 (3%)

Query: 1   MSRRLPPLYALRAFEAASRHNSFTRAAEELSITQSAVSRHIRTLEEHFACRLFQRSGRTL 60
           MSRRLPPL +L+ FEAA+RH SFTRAAEEL +TQ+AVS  I+ LEE    +LF+R  R+L
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  QLTEAARLLLPGVREGFAALERACHTL--NAEDDILRMKAPSTLTMRWLLARLSRFRALQ 118
            LTE  +     +++ F++L  A   L   +E   L +  P +  ++WL+ RL+ F   +
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 119 PGNEVQLTSAWMSVDEVDFNQEPFDCAVLLSYGHFPADWEASYLFPELLIPVGAPN-LLE 177
           P  +V++ +  + +DE     +  D A+    G +P    A  L+ E LIP+ +P  LL 
Sbjct: 121 PDIDVRIKA--VDMDEGSLTDD-VDVAIYYGRGSWPG-LRADKLYQEFLIPLCSPALLLG 176

Query: 178 DGPWD-VERLATAELLHPTPDRRDWRNWLERMGLSSQVSLKGGQVFDTLELGMIAAARGY 236
           + P + +  LA   LLH T  R+DW+ + +  GL + V++  G +F    + + AAA G 
Sbjct: 177 NKPMEKLSDLAYHTLLHDT-SRKDWKQFAKENGLDN-VNVNHGPIFSHSTMVLQAAAHGQ 234

Query: 237 GVSMGDLLMVAEDVAQGRLSLPWPTAVASGESYYLV 272
           GV++G+ ++   ++  GRL  P+   + +  ++Y+V
Sbjct: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVV 270