Pairwise Alignments

Query, 658 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  199 bits (505), Expect = 4e-55
 Identities = 129/374 (34%), Positives = 196/374 (52%), Gaps = 4/374 (1%)

Query: 288 WAVVASMPKAEIRSVTWDVGIRLVIGSVLAMLLAVGA-TVWLLRSKLAPLGDLVRQAE-- 344
           W +V  M K  +     D+ + + IG  L +LL +   T W +  +L  LG++       
Sbjct: 266 WLLVMVMDKGVLEQPLNDM-LMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADI 324

Query: 345 ALGAGDLSVRLNVSSHDEIGQLARSFNQMGEALSTMVSHIRKAAEEVNSRAQALSGLSGG 404
           A G GDL+ RL+V S DE+G LA  FN+  + L  MV ++R+ +  +   A   +  +  
Sbjct: 325 AEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQ 384

Query: 405 AYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGSTERLAQENAQQTRIGRNSMQEASSS 464
           A + +  Q  EIT +A AV E ++ +  IA N  +T + A ++ Q    G   MQ++  S
Sbjct: 385 ASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQS 444

Query: 465 LEHIAAALNSTATVINTLGQRSQEIGGIVGVITSIAEQTNLLALNAAIEAARAGEQGRGF 524
           ++ +A  L     +I+ L   + EI  I+  I  IAEQTNLLALNAAIEAARAGEQGRGF
Sbjct: 445 IDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGF 504

Query: 525 AVVADEVRNLASRTREATDEISGMIQSIQQETGNAISTMERGNVLMQEGLSRNADVASAL 584
           AVVADEVR L+ RT  +T+EI   I  +Q+ T  A+S M   + L++  ++      ++L
Sbjct: 505 AVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASL 564

Query: 585 ARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIALANSEQREVVSNLAITAKELE 644
             I E  +        I +A +EQS     ++ N +S+   + +  E        AK L 
Sbjct: 565 QAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLH 624

Query: 645 TLAAGLRHEVDRFR 658
            +A  L  E+ RF+
Sbjct: 625 AMAQELNKEISRFK 638