Pairwise Alignments

Query, 658 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (509), Expect = 1e-55
 Identities = 122/350 (34%), Positives = 199/350 (56%), Gaps = 3/350 (0%)

Query: 312 IGSVLAMLLAVGATVWLLRSKL-APLGDLVRQAEALGAGDLSVRLNVSS--HDEIGQLAR 368
           + S++A+L  + A  WLL + + +PL  +V QA A+  G+L+ RL+  +  HDE+G+LA 
Sbjct: 193 VASIVALLAFMSAVTWLLTNLICSPLMQVVTQANAIAEGNLAHRLDRKTIGHDELGELAD 252

Query: 369 SFNQMGEALSTMVSHIRKAAEEVNSRAQALSGLSGGAYEGMEQQSGEITSMAGAVEEFSA 428
           + ++M   L  MV  I  +A ++      +S +S    +GM+ Q  E+  +A A+ E  +
Sbjct: 253 ACSKMQNNLRLMVEEIITSATQLAHAVDEVSAVSEQTSQGMQIQQEEVMQIATAMAEMKS 312

Query: 429 TSLNIADNMGSTERLAQENAQQTRIGRNSMQEASSSLEHIAAALNSTATVINTLGQRSQE 488
           T   +A N       +++++Q   +G   M+  + S++H+   +  T   +  L  ++Q+
Sbjct: 313 TVAEVARNTEVASDASRDSSQHANVGSQQMRAVNDSIQHVNQEIGRTEQRVLELESQAQQ 372

Query: 489 IGGIVGVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTREATDEISGM 548
           I  +V VI++IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T+++T +I  +
Sbjct: 373 INMVVDVISNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGKTQQSTGDIVEI 432

Query: 549 IQSIQQETGNAISTMERGNVLMQEGLSRNADVASALARIDEQSRSAGQQFAAITTATQEQ 608
           IQ++Q     A  T      L+   + ++ +   A+ +I  QS         I +A  EQ
Sbjct: 433 IQNLQACAQKARETTNNSRELINHCVEQSQETQQAIEQIRHQSSQIADMTIQIASACGEQ 492

Query: 609 SSTATLLSSNLQSIALANSEQREVVSNLAITAKELETLAAGLRHEVDRFR 658
            S +  LS N++ I  +  +  +  S+ A +  EL  LA+ L+  V RFR
Sbjct: 493 DSVSEELSRNIERINESAKQVAQGSSSAAQSCAELSQLASQLQDTVQRFR 542