Pairwise Alignments

Query, 658 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (549), Expect = 3e-60
 Identities = 123/389 (31%), Positives = 204/389 (52%), Gaps = 2/389 (0%)

Query: 272 KNEEFYSVSVPFDGGPWAVVASMPKAEIRSVTWDVGIRLVIGSVLAMLLAVGATVWLLRS 331
           + EE    S+  +   W +V ++P  E+ +    V  R+++ ++    + +   ++L  S
Sbjct: 255 QGEEVMVASIYIESMDWFLVGTVPVHEVFAELDAVAQRMMLTTLAVAAIFIFMGIFLANS 314

Query: 332 KLAPLGDLVRQAEALGAGD--LSVRLNVSSHDEIGQLARSFNQMGEALSTMVSHIRKAAE 389
              P+  + ++   LG GD  LS R+ V  +DEI QL++ FN   E +   +  + + + 
Sbjct: 315 IAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFNGFIEKIHQSIKDVAQTSR 374

Query: 390 EVNSRAQALSGLSGGAYEGMEQQSGEITSMAGAVEEFSATSLNIADNMGSTERLAQENAQ 449
           E+   A+ +S  +   ++  +QQ  +   +  A+ +  AT   IA N  +    A + + 
Sbjct: 375 ELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATISEIASNAATAAETANQASG 434

Query: 450 QTRIGRNSMQEASSSLEHIAAALNSTATVINTLGQRSQEIGGIVGVITSIAEQTNLLALN 509
               GRN + +A  ++  +A  + +T  V+  L   +QEIG I+  I  I+EQTNLLALN
Sbjct: 435 NADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGSILDAIRGISEQTNLLALN 494

Query: 510 AAIEAARAGEQGRGFAVVADEVRNLASRTREATDEISGMIQSIQQETGNAISTMERGNVL 569
           AAIEAARAG+QGRGFAVVADEVRNLASRT  +T+EI  MI  +Q +  NA+S M+ G  +
Sbjct: 495 AAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQLQNDAKNAVSAMDAGKTV 554

Query: 570 MQEGLSRNADVASALARIDEQSRSAGQQFAAITTATQEQSSTATLLSSNLQSIALANSEQ 629
             +G++ + +    L  I ++      +   + TAT+EQS+    ++ N++ I   N   
Sbjct: 555 THQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTVVHTINQNIEEINAINEVT 614

Query: 630 REVVSNLAITAKELETLAAGLRHEVDRFR 658
                 LA  +K L  L+  L   V  F+
Sbjct: 615 TSTAEELADASKSLRELSGRLDKLVGNFK 643