Pairwise Alignments

Query, 445 a.a., ammonia channel protein from Pseudomonas simiae WCS417

Subject, 431 a.a., Ammonium transporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  513 bits (1322), Expect = e-150
 Identities = 269/443 (60%), Positives = 332/443 (74%), Gaps = 19/443 (4%)

Query: 3   LRKFAGL-GALLSIVMPSLAMAADEVAAPVLNSGDTAWMLTATALVLFMTIPGLALFYGG 61
           +R F  L  AL++++ P+LA A D  AAP L+SG+TAWMLT+TALVL MTIPGLALFY G
Sbjct: 2   MRAFTFLPAALVALLAPALAYAQD--AAPTLDSGNTAWMLTSTALVLLMTIPGLALFYAG 59

Query: 62  MVRSKNILSVMMQCFAITGLISILWVVYGYSIAFDTTGMEQGVVNFNSFFGGMGKAFLAG 121
           MVR KN+L+ MMQ F IT L+S++W+V GYSIAF T          N++FG   K  L+ 
Sbjct: 60  MVRKKNVLATMMQSFIITALVSVVWMVAGYSIAFGTG---------NAYFGDFSKFLLSD 110

Query: 122 VTPASITGPAALFPEAVFITFQMTFAIITPALIVGAFAERMKFSAMLIFMAIWFTLVYAP 181
           ++  S+ G    FPE VF+ FQMTFAIITPALI GAFAERMKFSAML F+ +W  +VYAP
Sbjct: 111 ISIDSLNGT---FPETVFVVFQMTFAIITPALITGAFAERMKFSAMLWFIGLWVLIVYAP 167

Query: 182 IAHMVWSGNGGLMWDWGVLDFAGGTVVHINAGVAGLVACIVLGKRKGFPTTPMAPHNLGY 241
           I H VWS +G  +++ GVLD+AGGTVVHINAGVAGLV  +VL +R GF +  MAP+NL  
Sbjct: 168 ICHWVWSSSG-FLFNAGVLDYAGGTVVHINAGVAGLVCALVLRRRAGFGSENMAPYNLSL 226

Query: 242 TLIGAAMLWIGWFGFNAGSAAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSALG 301
            +IGAA+LW+GWFGFNAGSA AA+G AGMAML TQ+  A A L W+ AEW+  GKPS LG
Sbjct: 227 AVIGAALLWVGWFGFNAGSAVAADGRAGMAMLATQLGAAGATLSWIAAEWLVRGKPSVLG 286

Query: 302 IASGVVAGLVAITPAAGTVGPMGALVIGLVAGVICFFCATSLKRKLGYDDSLDAFGVHGI 361
             SG VAGLVAITPA+G V P GALVIGLVAGV+CF+ AT LK+ LGYDDSLDAFGVHGI
Sbjct: 287 AVSGAVAGLVAITPASGFVLPGGALVIGLVAGVVCFWGATWLKKTLGYDDSLDAFGVHGI 346

Query: 362 GGIVGAILTGVFAAPALGG---FGTVTDVAAQVWIQCKGVGFTVIYTAIVTYVILKVLDM 418
           GG+VGA+LTGVFAA ++GG    G +     QV  Q  G   T+++TA+ +YVILKV+D+
Sbjct: 347 GGLVGALLTGVFAAQSVGGEAAVGLLEGNPGQVLTQAWGCLATIVWTAVASYVILKVIDL 406

Query: 419 VMGLRVTEEEEAVGLDLAQHNER 441
            +GLRV+ E+E+ GLD++ H ER
Sbjct: 407 AIGLRVSPEQESEGLDISLHGER 429